Alexander Karollus

4PUBLICATIONS
7CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Evolution of developmental systemsGenomics and transcriptomics
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Publications (4)

|Sep 30, 2024
scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution.

Johannes C Hingerl, Laura D Martens, Alexander Karollus

|Apr 02, 2024
Species-aware DNA language models capture regulatory elements and their evolution.

Alexander Karollus, Johannes Hingerl, Dennis Gankin

|Mar 27, 2023
Current sequence-based models capture gene expression determinants in promoters but mostly ignore distal enhancers.

Alexander Karollus, Thomas Mauermeier, Julien Gagneur

|May 10, 2021
Predicting mean ribosome load for 5'UTR of any length using deep learning.

Alexander Karollus, Žiga Avsec, Julien Gagneur

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Frequent Collaborators

2 joint publications

Julien Gagneur

1 joint publications

Žiga Avsec

1 joint publications

Johannes C Hingerl

1 joint publications

Laura D Martens