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Žiga Avsec

8PUBLICATIONS

52CO-AUTHORS

Epigenetics (incl. genome methylation and epigenomics)Gene expression (incl. microarray and other genome-wide approaches)Deep learningGenomics and transcriptomicsCognition

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Publications (8)

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|Nov 28, 2023

An encyclopedia of enhancer-gene regulatory interactions in the human genome.

Andreas R Gschwind, Kristy S Mualim, Alireza Karbalayghareh

|Sep 21, 2023

Accurate proteome-wide missense variant effect prediction with AlphaMissense.

Jun Cheng, Guido Novati, Joshua Pan

|Oct 05, 2021

Effective gene expression prediction from sequence by integrating long-range interactions.

Žiga Avsec, Vikram Agarwal, Daniel Visentin

|Aug 31, 2021

Mapping single-cell data to reference atlases by transfer learning.

Mohammad Lotfollahi, Mohsen Naghipourfar, Malte D Luecken

|May 10, 2021

Predicting mean ribosome load for 5'UTR of any length using deep learning.

Alexander Karollus, Žiga Avsec, Julien Gagneur

|Feb 19, 2021

Base-resolution models of transcription-factor binding reveal soft motif syntax.

Žiga Avsec, Melanie Weilert, Avanti Shrikumar

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Frequent Collaborators

3 joint publications

Anshul Kundaje

3 joint publications

Julien Gagneur

2 joint publications

Jun Cheng

2 joint publications

David R Kelley

2 joint publications

Pushmeet Kohli

1 joint publications

Lara Urban

1 joint publications

Stephen M Mount

1 joint publications

Jesse M Engreitz

1 joint publications

Muhammed Hasan Çelik

1 joint publications

Ken Chen

Frequent Collaborators

3 joint publications

Anshul Kundaje

3 joint publications

Julien Gagneur

2 joint publications

Jun Cheng

2 joint publications

David R Kelley

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