Luis M Rodriguez-R

24PUBLICATIONS
43CO-AUTHORS
Microbial geneticsPhylogeny and comparative analysisQuery processing and optimisationBioinformatics and computational biology not elsewhere classifiedComputational ecology and phylogenetics
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Publications (24)

|Apr 23, 2026
An ANIr-based methodology to determine if two sequence-discrete populations are identical and identify cosmopolitan prokaryotic populations.

|Apr 27, 2025
FastAAI: efficient estimation of genome average amino acid identity and phylum-level relationships using tetramers of universal proteins.

Kenji Gerhardt, Carlos A Ruiz-Perez, Luis M Rodriguez-R

|Jul 16, 2024
GSearch: ultra-fast and scalable genome search by combining K-mer hashing with hierarchical navigable small world graphs.

Jianshu Zhao, Jean Pierre Both, Luis M Rodriguez-R

|Jun 03, 2024
Why and how to use the SeqCode.

William B Whitman, Maria Chuvochina, Brian P Hedlund

|Jan 16, 2024
Towards estimating the number of strains that make up a natural bacterial population.

Tomeu Viver, Roth E Conrad, Luis M Rodriguez-R

|Dec 12, 2023
An ANI gap within bacterial species that advances the definitions of intra-species units.

Luis M Rodriguez-R, Roth E Conrad, Tomeu Viver

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Frequent Collaborators

10 joint publications

Konstantinos T Konstantinidis

3 joint publications

Joel E Kostka

3 joint publications

Brittany Suttner

2 joint publications

Marike Palmer