Shila Ghazanfar

19PUBLICATIONS

89CO-AUTHORS

Genomics and transcriptomicsSoftware architectureBioinformatic methods developmentPredictive and prognostic markersInformation retrieval and web search

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Publications (19)

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|Oct 05, 2026

Weighted sliced inverse regression for scalable supervised dimensionality reduction of spatial transcriptomics data.

|Dec 03, 2025

Orchestrating Spatial Transcriptomics Analysis with Bioconductor.

Helena L Crowell, Yixing Dong, Ilaria Billato

|Oct 14, 2025

Multitask benchmarking of single-cell multimodal omics integration methods.

Chunlei Liu, Sichang Ding, Hani Jieun Kim

|Aug 04, 2025

Mutational Analysis of Early, Low-Grade Bowel Polyps Defines a Subgroup with Concurrent, High-Risk Oncogenic Drivers Independent of Polyp Size.

Jun Li, Zoe Welham, Benita Tse

|Apr 11, 2025

HuBMAPR: an R client for the HuBMAP data portal.

Christine Hou, Shila Ghazanfar, Federico Marini

|Feb 12, 2025

Integrating Spatially-Resolved Transcriptomics Data Across Tissues and Individuals: Challenges and Opportunities.

Boyi Guo, Wodan Ling, Sang Ho Kwon

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Frequent Collaborators

Stephanie C Hicks

Pratibha Panwar

Ellis Patrick

Jean Yang

Boyi Guo

Keri Martinowich

Ralph Patrick

Xiaohang Fu

Dario Righelli

Helena L Crowell

Frequent Collaborators

Stephanie C Hicks

Pratibha Panwar

Ellis Patrick

Jean Yang