Shila Ghazanfar

18PUBLICATIONS
86CO-AUTHORS
Software architectureBioinformatic methods developmentPredictive and prognostic markersInformation retrieval and web searchGenomics and transcriptomics
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Publications (18)

|Dec 03, 2025
Orchestrating Spatial Transcriptomics Analysis with Bioconductor.

Helena L Crowell, Yixing Dong, Ilaria Billato

|Oct 14, 2025
Multitask benchmarking of single-cell multimodal omics integration methods.

Chunlei Liu, Sichang Ding, Hani Jieun Kim

|Aug 04, 2025
Mutational Analysis of Early, Low-Grade Bowel Polyps Defines a Subgroup with Concurrent, High-Risk Oncogenic Drivers Independent of Polyp Size.

Jun Li, Zoe Welham, Benita Tse

|Apr 11, 2025
HuBMAPR: an R client for the HuBMAP data portal.

Christine Hou, Shila Ghazanfar, Federico Marini

|Feb 12, 2025
Integrating Spatially-Resolved Transcriptomics Data Across Tissues and Individuals: Challenges and Opportunities.

Boyi Guo, Wodan Ling, Sang Ho Kwon

|Feb 11, 2025
Benchmarking the translational potential of spatial gene expression prediction from histology.

Chuhan Wang, Adam S Chan, Xiaohang Fu

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Frequent Collaborators

6 joint publications

Stephanie C Hicks

5 joint publications

Ellis Patrick

4 joint publications

Jean Yang

4 joint publications

Pratibha Panwar