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Ellis Patrick

32PUBLICATIONS

137CO-AUTHORS

Gene expression (incl. microarray and other genome-wide approaches)Software architectureInnate immunityGenomics and transcriptomicsApplied immunology (incl. antibody engineering, xenotransplantation and t-cell therapies)

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Publications (32)

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|Apr 11, 2026

Interpretable deep generative ensemble learning for single-cell omics with Hydra.

Manoj M Wagle, Chunlei Liu, Zunpeng Liu

|Dec 03, 2025

Orchestrating Spatial Transcriptomics Analysis with Bioconductor.

Helena L Crowell, Yixing Dong, Ilaria Billato

|Oct 01, 2025

Tissue-wide profiling of human lungs reveals spatial sequestration of macrophages in tuberculosis.

Wei Xiao, Andrew J Sawyer, Siwei Mo

|Sep 15, 2025

Spatial gene expression at single-cell resolution from histology using deep learning with GHIST.

Xiaohang Fu, Yue Cao, Beilei Bian

|Feb 11, 2025

Benchmarking the translational potential of spatial gene expression prediction from histology.

Chuhan Wang, Adam S Chan, Xiaohang Fu

|Jun 18, 2024

Decoding the hallmarks of allograft dysfunction with a comprehensive pan-organ transcriptomic atlas.

Harry Robertson, Hani Jieun Kim, Jennifer Li

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Frequent Collaborators

7 joint publications

Jean Yee Hwa Yang

5 joint publications

Shila Ghazanfar

4 joint publications

Andrew N Harman

3 joint publications

Xiaohang Fu

3 joint publications

Heeva Baharlou

3 joint publications

Yue Cao

3 joint publications

Philip L De Jager

3 joint publications

Jake W Rhodes

3 joint publications

Pengyi Yang

3 joint publications

Eric Hunter

Frequent Collaborators

7 joint publications

Jean Yee Hwa Yang

5 joint publications

Shila Ghazanfar

4 joint publications

Andrew N Harman

3 joint publications

Xiaohang Fu

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