Ellis Patrick

33PUBLICATIONS
139CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Software architectureInnate immunityGenomics and transcriptomicsApplied immunology (incl. antibody engineering, xenotransplantation and t-cell therapies)
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Publications (33)

|Aug 01, 2026
Deep interpretable learning of sample representations for characterizing disease states in single-cell transcriptomics.

|Apr 11, 2026
Interpretable deep generative ensemble learning for single-cell omics with Hydra.

Manoj M Wagle, Chunlei Liu, Zunpeng Liu

|Dec 03, 2025
Orchestrating Spatial Transcriptomics Analysis with Bioconductor.

Helena L Crowell, Yixing Dong, Ilaria Billato

|Oct 01, 2025
Tissue-wide profiling of human lungs reveals spatial sequestration of macrophages in tuberculosis.

Wei Xiao, Andrew J Sawyer, Siwei Mo

|Sep 15, 2025
Spatial gene expression at single-cell resolution from histology using deep learning with GHIST.

Xiaohang Fu, Yue Cao, Beilei Bian

|Feb 11, 2025
Benchmarking the translational potential of spatial gene expression prediction from histology.

Chuhan Wang, Adam S Chan, Xiaohang Fu

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Frequent Collaborators

7 joint publications

Jean Yee Hwa Yang

5 joint publications

Shila Ghazanfar

4 joint publications

Pengyi Yang

4 joint publications

Andrew N Harman