Dongze He

10PUBLICATIONS
18CO-AUTHORS
Cancer geneticsNatural language processingGenomics and transcriptomicsGene expression (incl. microarray and other genome-wide approaches)Sequence analysis
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Publications (10)

|Jun 11, 2026
Dynamic transitioning between MAPK-driven and WNT-driven cell states drives intestinal cancer and shapes therapy response.

|Jul 16, 2025
QCatch: A framework for quality control assessment and analysis of single-cell sequencing data.

Yuan Gao, Dongze He, Rob Patro

|Jun 28, 2024
Forseti: a mechanistic and predictive model of the splicing status of scRNA-seq reads.

Dongze He, Yuan Gao, Spencer Skylar Chan

|Jun 18, 2024
DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes.

Simone Tiberi, Joël Meili, Peiying Cai

|Feb 19, 2024
Forseti: A mechanistic and predictive model of the splicing status of scRNA-seq reads.

Dongze He, Yuan Gao, Spencer Skylar Chan

|Feb 14, 2024
scCensus: Off-target scRNA-seq reads reveal meaningful biology.

Dongze He, Stephen M Mount, Rob Patro

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Frequent Collaborators

9 joint publications

Rob Patro

3 joint publications

Yuan Gao

2 joint publications

Simone Tiberi

2 joint publications

Mark D Robinson