Rob Patro

36PUBLICATIONS
59CO-AUTHORS
Formal methods for softwareQuery processing and optimisationGenomics and transcriptomicsProcedural content generationInformation extraction and fusion
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Publications (36)

|Aug 20, 2026
seqproc: An efficient, flexible, and concise tool for sequence geometry description and transformation.

|Jun 19, 2026
Kaminari: a frugal colored index for approximate k-mer queries.

|Jun 05, 2026
Highly Constrained Kinetic Models for Single-Cell Gene Expression Analysis.

|Feb 27, 2026
k ache-hash: A dynamic, concurrent, and cache-efficient hash table for streaming k -mer operations.

Jamshed Khan, Rob Patro, Prashant Pandey

|Feb 06, 2026
Optimizing sparse and skew hashing: faster k -mer dictionaries.

Giulio Ermanno Pibiri, Rob Patro

|Dec 15, 2025
mim: A lightweight auxiliary index to enable fast, parallel, gzipped FASTQ parsing.

Rob Patro, Siddhant Bharti, Prajwal Singhania

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Frequent Collaborators

9 joint publications

Dongze He

7 joint publications

Jamshed Khan

6 joint publications

Giulio Ermanno Pibiri

5 joint publications

Noor Pratap Singh