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Jason Fan

5PUBLICATIONS

8CO-AUTHORS

Gene expression (incl. microarray and other genome-wide approaches)Coding, information theory and compressionInformation retrieval and web searchPredictive and prognostic markers

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Publications (5)

Sort by Publication Date:

|Aug 21, 2025

Tree-based differential testing using inferential uncertainty for RNA-seq.

Noor Pratap Singh, Euphy Y Wu, Jason Fan

|Oct 09, 2024

Where the Patterns Are: Repetition-Aware Compression for Colored de Bruijn Graphs<sup></sup>.

Alessio Campanelli, Giulio Ermanno Pibiri, Jason Fan

|Jan 18, 2024

Tree-based differential testing using inferential uncertainty for RNA-Seq.

Noor Pratap Singh, Euphy Y Wu, Jason Fan

|May 22, 2023

Fulgor: A fast and compact <i>k</i>-mer index for large-scale matching and color queries.

Jason Fan, Noor Pratap Singh, Jamshed Khan

|Jan 05, 2022

ScalpelSig Designs Targeted Genomic Panels from Data to Detect Activity of Mutational Signatures.

Nicholas Franzese, Jason Fan, Roded Sharan

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Frequent Collaborators

4 joint publications

Rob Patro

3 joint publications

Noor Pratap Singh

2 joint publications

Giulio Ermanno Pibiri

2 joint publications

Euphy Y Wu

2 joint publications

Michael I Love

1 joint publications

Nicholas Franzese

1 joint publications

Mark D M Leiserson

1 joint publications

Jamshed Khan

Frequent Collaborators

4 joint publications

Rob Patro

3 joint publications

Noor Pratap Singh

2 joint publications

Giulio Ermanno Pibiri

2 joint publications

Euphy Y Wu

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