Yoann Dufresne

6PUBLICATIONS
14CO-AUTHORS
Query processing and optimisationMultimodal analysis and synthesisPopulation geographyRequirements engineeringInformation extraction and fusion
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Publications (6)

|Jun 19, 2026
Kaminari: a frugal colored index for approximate k-mer queries.

|Feb 03, 2025
MUSET: set of utilities for constructing abundance unitig matrices from sequencing data.

Riccardo Vicedomini, Francesco Andreace, Yoann Dufresne

|Oct 21, 2024
Constructing and personalizing population pangenome graphs.

Rayan Chikhi, Yoann Dufresne, Paul Medvedev

|Aug 23, 2023
BioConvert: a comprehensive format converter for life sciences.

Hugo Caro, Sulyvan Dollin, Anne Biton

|Jul 29, 2022
The K-mer File Format: a standardized and compact disk representation of sets of k-mers.

Yoann Dufresne, Teo Lemane, Pierre Marijon

|Dec 31, 2015
Smiles2Monomers: a link between chemical and biological structures for polymers.

Yoann Dufresne, Laurent Noé, Valérie Leclère

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Frequent Collaborators

2 joint publications

Pierre Peterlongo

2 joint publications

Rayan Chikhi

1 joint publications

Teo Lemane

1 joint publications

Paul Medvedev