Bengong Zhang

7PUBLICATIONS
3CO-AUTHORS
Bioinformatic methods developmentBiological network analysisEvolution of developmental systemsEpigenetics (incl. genome methylation and epigenomics)Sequence analysis
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Publications (7)

|Mar 27, 2026
R3J-AGNN: GNN-Based Prediction of Inter-Branch Angles in RNA Three-Way Junctions from Secondary Structure.

Hu Yang, Ning Qiao, Bengong Zhang

|Feb 27, 2026
gCoSRNA: Generalizable Coaxial Stacking Prediction for RNA Junctions Using Secondary Structure.

Shasha Li, Qianqian Xu, Ya-Lan Tan

|Nov 03, 2025
Branch-specific gene discovery in cell differentiation using multi-omics graph attention.

Yihao Yin, Linzhi Zhuang, Yulei Wang

|Sep 02, 2025
Marker genes reveal dynamic features of cell evolving processes.

Wenjie Cao, Bengong Zhang, Tianshou Zhou

|Nov 25, 2024
scGRN-Entropy: Inferring cell differentiation trajectories using single-cell data and gene regulation network-based transfer entropy.

Rui Sun, Wenjie Cao, ShengXuan Li

|Mar 28, 2024
ABC2A: A Straightforward and Fast Method for the Accurate Backmapping of RNA Coarse-Grained Models to All-Atom Structures.

Ya-Zhou Shi, Hao Wu, Sha-Sha Li

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Frequent Collaborators

4 joint publications

Yazhou Shi

1 joint publications

Wenjie Cao

1 joint publications

Ya-Lan Tan