Yazhou Shi

7PUBLICATIONS
4CO-AUTHORS
Bioinformatic methods developmentBiological network analysisElectrochemical energy storage and conversionEpigenetics (incl. genome methylation and epigenomics)Sequence analysis
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Publications (7)

|Mar 27, 2026
R3J-AGNN: GNN-Based Prediction of Inter-Branch Angles in RNA Three-Way Junctions from Secondary Structure.

Hu Yang, Ning Qiao, Bengong Zhang

|Feb 27, 2026
gCoSRNA: Generalizable Coaxial Stacking Prediction for RNA Junctions Using Secondary Structure.

Shasha Li, Qianqian Xu, Ya-Lan Tan

|Jan 14, 2026
TiRNA: a coarse-grained method with temperature and ion effects for RNA structure folding and prediction.

Xunxun Wang, Zouchenyu Zhou, Shixiong Yu

|Aug 18, 2025
3D structure and stability prediction of DNA with multi-way junctions in ionic solutions.

Xunxun Wang, Ya-Zhou Shi

|Nov 25, 2024
scGRN-Entropy: Inferring cell differentiation trajectories using single-cell data and gene regulation network-based transfer entropy.

Rui Sun, Wenjie Cao, ShengXuan Li

|Mar 28, 2024
ABC2A: A Straightforward and Fast Method for the Accurate Backmapping of RNA Coarse-Grained Models to All-Atom Structures.

Ya-Zhou Shi, Hao Wu, Sha-Sha Li

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Frequent Collaborators

4 joint publications

Bengong Zhang

1 joint publications

Xunxun Wang

1 joint publications

Zhi-Jie Tan

1 joint publications

Ya-Lan Tan