Can Ergen

12PUBLICATIONS
68CO-AUTHORS
Genomics and transcriptomicsGene expression (incl. microarray and other genome-wide approaches)Speech recognitionInformation retrieval and web searchInnate immunity
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Publications (12)

|Sep 30, 2026
CytoVI: deep generative modeling of antibody-based single cell data.

|Sep 24, 2026
ResolVI: addressing noise and bias in spatial transcriptomics.

|Oct 14, 2025
Deep generative modeling of sample-level heterogeneity in single-cell genomics.

Pierre Boyeau, Justin Hong, Adam Gayoso

|Oct 03, 2025
AMICI: Attention Mechanism Interpretation of Cell-cell Interactions.

Justin Hong, Khushi Desai, Tu Duyen Nguyen

|Sep 08, 2025
Scvi-hub: an actionable repository for model-driven single-cell analysis.

Can Ergen, Valeh Valiollah Pour Amiri, Martin Kim

|Aug 13, 2025
Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age.

Steven B Wells, Daniel B Rainbow, Michal Mark

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Frequent Collaborators

9 joint publications

Nir Yosef

3 joint publications

Donna L Farber

3 joint publications

Martin Kim

3 joint publications

Joanne L Jones