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Can Ergen

10PUBLICATIONS

64CO-AUTHORS

Gene expression (incl. microarray and other genome-wide approaches)Speech recognitionInformation retrieval and web searchInnate immunityEpigenetics (incl. genome methylation and epigenomics)

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Publications (10)

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|Oct 14, 2025

Deep generative modeling of sample-level heterogeneity in single-cell genomics.

Pierre Boyeau, Justin Hong, Adam Gayoso

|Oct 03, 2025

AMICI: Attention Mechanism Interpretation of Cell-cell Interactions.

Justin Hong, Khushi Desai, Tu Duyen Nguyen

|Sep 08, 2025

Scvi-hub: an actionable repository for model-driven single-cell analysis.

Can Ergen, Valeh Valiollah Pour Amiri, Martin Kim

|Aug 13, 2025

Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age.

Steven B Wells, Daniel B Rainbow, Michal Mark

|Jul 24, 2025

High-resolution spatial mapping of cell state and lineage dynamics in vivo with PEtracer.

Luke W Koblan, Kathryn E Yost, Pu Zheng

|Jul 15, 2025

High-resolution spatial mapping of cell state and lineage dynamics <i>in vivo</i> with PEtracer.

Luke W Koblan, Kathryn E Yost, Pu Zheng

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Frequent Collaborators

7 joint publications

Nir Yosef

3 joint publications

Donna L Farber

3 joint publications

Joanne L Jones

3 joint publications

Daniel Rainbow

3 joint publications

Steven B Wells

2 joint publications

Valeh Valiollah Pour Amiri

2 joint publications

Peter Szabo

2 joint publications

Allon Wagner

2 joint publications

Daniel P Caron

2 joint publications

Lorna B Jarvis

Frequent Collaborators

7 joint publications

Nir Yosef

3 joint publications

Donna L Farber

3 joint publications

Joanne L Jones

3 joint publications

Daniel Rainbow

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