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Pascal Auffinger

11PUBLICATIONS
11CO-AUTHORS
Computational chemistryMain group metal chemistryPhotonics, optoelectronics and optical communicationsNonlinear optics and spectroscopyRadiation and matter
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Journal

Publications (11)

Sort by Publication Date:
|Feb 23, 2026
Cat_Wiz: a stereochemistry-guided toolkit for locating, diagnosing, and annotating Mg2+ ions in RNA structures.

Nawavi Naleem, Anja Henning-Knechtel, Serdal Kirmizialtin

|Jan 10, 2025
Principles of ion binding to RNA inferred from the analysis of a 1.55 Å resolution bacterial ribosome structure - Part I: Mg2.

Filip Leonarski, Anja Henning-Knechtel, Serdal Kirmizialtin

|Dec 01, 2022
Multiscale Modeling of Phosphate···π Contacts in RNA U-Turns Exposes Differences between Quantum-Chemical and AMBER Force Field Descriptions.

Klaudia Mráziková, Holger Kruse, Vojtěch Mlýnský

|Jul 27, 2022
Lone Pair…π Contacts and Structure Signatures of r(UNCG) Tetraloops, Z-Turns, and Z-Steps: A WebFR3D Survey.

Craig L Zirbel, Pascal Auffinger

|Nov 05, 2021
Short-Range Imbalances in the AMBER Lennard-Jones Potential for (Deoxy)Ribose···Nucleobase Lone-Pair···π Contacts in Nucleic Acids.

Klaudia Mráziková, Jiří Šponer, Vojtěch Mlýnský

|Dec 03, 2020
Deflating the RNA Mg<sup>2+</sup> bubble: stereochemistry to the rescue!

Pascal Auffinger, Eric Ennifar, Luigi D'Ascenzo

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Frequent Collaborators

4 joint publications

Luigi D'Ascenzo

4 joint publications

Holger Kruse

4 joint publications

Jiri Sponer

3 joint publications

Filip Leonarski

3 joint publications

Klaudia Mrazikova

2 joint publications

Eric Ennifar

2 joint publications

Vojtěch Mlýnský

2 joint publications

Serdal Kirmizialtin

1 joint publications

Quentin Vicens

1 joint publications

Craig L Zirbel

Frequent Collaborators

4 joint publications

Luigi D'Ascenzo

4 joint publications

Holger Kruse

4 joint publications

Jiri Sponer

3 joint publications

Filip Leonarski

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