Pascal Auffinger
11PUBLICATIONS
11CO-AUTHORS
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Publications (11)
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|Feb 23, 2026
Cat_Wiz: a stereochemistry-guided toolkit for locating, diagnosing, and annotating Mg2+ ions in RNA structures.Nawavi Naleem, Anja Henning-Knechtel, Serdal Kirmizialtin
|Jan 10, 2025
Principles of ion binding to RNA inferred from the analysis of a 1.55 Å resolution bacterial ribosome structure - Part I: Mg2.Filip Leonarski, Anja Henning-Knechtel, Serdal Kirmizialtin
|Dec 01, 2022
Multiscale Modeling of Phosphate···π Contacts in RNA U-Turns Exposes Differences between Quantum-Chemical and AMBER Force Field Descriptions.Klaudia Mráziková, Holger Kruse, Vojtěch Mlýnský
|Jul 27, 2022
Lone Pair…π Contacts and Structure Signatures of r(UNCG) Tetraloops, Z-Turns, and Z-Steps: A WebFR3D Survey.Craig L Zirbel, Pascal Auffinger
|Nov 05, 2021
Short-Range Imbalances in the AMBER Lennard-Jones Potential for (Deoxy)Ribose···Nucleobase Lone-Pair···π Contacts in Nucleic Acids.Klaudia Mráziková, Jiří Šponer, Vojtěch Mlýnský
|Dec 03, 2020
Deflating the RNA Mg2+ bubble: stereochemistry to the rescue!Pascal Auffinger, Eric Ennifar, Luigi D'Ascenzo
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Frequent Collaborators
4 joint publications
Luigi D'Ascenzo
4 joint publications
Holger Kruse
4 joint publications
Jiri Sponer
3 joint publications
Filip Leonarski
3 joint publications
Klaudia Mrazikova
2 joint publications
Eric Ennifar
2 joint publications
Vojtěch Mlýnský
2 joint publications
Serdal Kirmizialtin
1 joint publications
Quentin Vicens
1 joint publications
Craig L Zirbel
