Barış Ekim

4PUBLICATIONS
6CO-AUTHORS
Genome structure and regulationApplications in physical sciencesFormal methods for softwareGene mapping
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Publications (4)

|Nov 14, 2025
Graph-based deep reinforcement learning for haplotype assembly with Ralphi.

Enzo Battistella, Anant Maheshwari, Barış Ekim

|Jun 05, 2024
A Randomized Parallel Algorithm for Efficiently Finding Near-Optimal Universal Hitting Sets.

Barış Ekim, Bonnie Berger, Yaron Orenstein

|Aug 09, 2023
Efficient minimizer orders for large values of k using minimum decycling sets.

David Pellow, Lianrong Pu, Bariş Ekim

|Jul 03, 2023
Efficient mapping of accurate long reads in minimizer space with mapquik.

Bariş Ekim, Kristoffer Sahlin, Paul Medvedev

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