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Barış Ekim

4PUBLICATIONS
6CO-AUTHORS
Genome structure and regulationApplications in physical sciencesFormal methods for softwareGene mapping
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Publications (4)

Sort by Publication Date:
|Nov 14, 2025
Graph-based deep reinforcement learning for haplotype assembly with Ralphi.

Enzo Battistella, Anant Maheshwari, Barış Ekim

|Jun 05, 2024
A Randomized Parallel Algorithm for Efficiently Finding Near-Optimal Universal Hitting Sets.

Barış Ekim, Bonnie Berger, Yaron Orenstein

|Aug 09, 2023
Efficient minimizer orders for large values of <i>k</i> using minimum decycling sets.

David Pellow, Lianrong Pu, Bariş Ekim

|Jul 03, 2023
Efficient mapping of accurate long reads in minimizer space with mapquik.

Bariş Ekim, Kristoffer Sahlin, Paul Medvedev

Pageof 1

Frequent Collaborators

2 joint publications

Bonnie Berger

2 joint publications

Yaron Orenstein

1 joint publications

Kristoffer Sahlin

1 joint publications

Paul Medvedev

1 joint publications

Rayan Chikhi

1 joint publications

Ron Shamir

Frequent Collaborators

2 joint publications

Bonnie Berger

2 joint publications

Yaron Orenstein

1 joint publications

Kristoffer Sahlin

1 joint publications

Paul Medvedev

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