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Deniz Akpinaroglu

4PUBLICATIONS

9CO-AUTHORS

Bioinformatic methods developmentModels and simulations of designDeep learningApplied immunology (incl. antibody engineering, xenotransplantation and t-cell therapies)

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Publications (4)

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|Aug 06, 2025

A combinatorial mutational map of active non-native protein kinases by deep learning guided sequence design.

Kosuke Seki, Amy B Guo, Deniz Akpinaroglu

|Jun 12, 2025

An improved model for prediction of de novo designed proteins with diverse geometries.

Benjamin Orr, Stephanie E Crilly, Deniz Akpinaroglu

|Jul 29, 2024

Deep learning guided design of dynamic proteins.

Amy B Guo, Deniz Akpinaroglu, Mark J S Kelly

|Jun 15, 2022

Simultaneous prediction of antibody backbone and side-chain conformations with deep learning.

Deniz Akpinaroglu, Jeffrey A Ruffolo, Sai Pooja Mahajan

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Frequent Collaborators

3 joint publications

Tanja Kortemme

2 joint publications

Amy B Guo

1 joint publications

Jeffrey A Ruffolo

1 joint publications

Jeffrey J Gray

1 joint publications

Mark J S Kelly

1 joint publications

Benjamin Orr

1 joint publications

Stephanie E Crilly

1 joint publications

Michael J Keiser

1 joint publications

Kosuke Seki

Frequent Collaborators

3 joint publications

Tanja Kortemme

2 joint publications

Amy B Guo

1 joint publications

Jeffrey A Ruffolo

1 joint publications

Jeffrey J Gray

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