Vindi M Jayasinghe-Arachchige
5PUBLICATIONS
11CO-AUTHORS
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Publications (5)
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|Apr 28, 2025
Structure-Based Classification of CRISPR/Cas9 Proteins: A Machine Learning Approach to Elucidating Cas9 Allostery.Sita Sirisha Madugula, Vindi M Jayasinghe-Arachchige, Charlene Norgan Radler
|Mar 10, 2025
CasGen: A Regularized Generative Model for CRISPR Cas Protein Design with Classification and Margin-Based Optimization.Bharani Nammi, Vindi M Jayasinghe-Arachchige, Sita Sirisha Madugula
|Jun 05, 2024
Identification of Family-Specific Features in Cas9 and Cas12 Proteins: A Machine Learning Approach Using Complete Protein Feature Spectrum.Sita Sirisha Madugula, Pranav Pujar, Bharani Nammi
|Feb 08, 2024
Identification of Family-Specific Features in Cas9 and Cas12 Proteins: A Machine Learning Approach Using Complete Protein Feature Spectrum.Sita Sirisha Madugula, Pranav Pujar, Nammi Bharani
|Oct 25, 2023
Leveraging QM/MM and Molecular Dynamics Simulations to Decipher the Reaction Mechanism of the Cas9 HNH Domain to Investigate Off-Target Effects.Yazdan Maghsoud, Vindi M Jayasinghe-Arachchige, Pratibha Kumari
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Frequent Collaborators
5 joint publications
Jin Liu
4 joint publications
Sita Sirisha Madugula
3 joint publications
Shouyi Wang
2 joint publications
Nammi Bharani
1 joint publications
Yazdan Maghsoud
1 joint publications
Pratibha Kumari
1 joint publications
G Andrés Cisneros
1 joint publications
Pranav Pujar
1 joint publications
Maria Artiles
1 joint publications
Tyler Pham
