Jin Liu

17PUBLICATIONS
32CO-AUTHORS
Deep learningGenome structure and regulationProcess control and simulationMolecular targetsCheminformatics and quantitative structure-activity relationships
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Publications (17)

|Aug 11, 2025
I‑GAT: Interpretable Graph Attention Networks for Ligand Optimization.

Ezek Mathew, Kyle A Emmitte, Jin Liu

|Apr 28, 2025
Structure-Based Classification of CRISPR/Cas9 Proteins: A Machine Learning Approach to Elucidating Cas9 Allostery.

Sita Sirisha Madugula, Vindi M Jayasinghe-Arachchige, Charlene Norgan Radler

|Mar 10, 2025
CasGen: A Regularized Generative Model for CRISPR Cas Protein Design with Classification and Margin-Based Optimization.

Bharani Nammi, Vindi M Jayasinghe-Arachchige, Sita Sirisha Madugula

|Dec 16, 2024
Exploring CRISPR-Cas9 HNH-Domain-Catalyzed DNA Cleavage Using Accelerated Quantum Mechanical Molecular Mechanical Free Energy Simulation.

Richard Van, Xiaoliang Pan, Saadi Rostami

|Jun 05, 2024
Identification of Family-Specific Features in Cas9 and Cas12 Proteins: A Machine Learning Approach Using Complete Protein Feature Spectrum.

Sita Sirisha Madugula, Pranav Pujar, Bharani Nammi

|Apr 16, 2024
Secondary Conformational Checkpoint in CRISPR-Cas9.

Shuxin Zhao, Jin Liu, Zhicheng Zuo

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Frequent Collaborators

5 joint publications

Hamed S Hayatshahi

5 joint publications

Vindi M Jayasinghe-Arachchige

4 joint publications

Sita Sirisha Madugula

4 joint publications

Shouyi Wang