Karolina Jodkowska

4PUBLICATIONS
11CO-AUTHORS
Genome structure and regulationStructural biology (incl. macromolecular modelling)Genomics and transcriptomics
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Publications (4)

|Jun 22, 2026
RepliSage: a stochastic graph-based framework for 3D chromatin modeling across the cell cycle.

|Apr 16, 2025
Chromatin as a Coevolutionary Graph: Modeling the Interplay of Replication with Chromatin Dynamics.

Sevastianos Korsak, Krzysztof H Banecki, Karolina Buka

|Mar 14, 2025
Improved cohesin HiChIP protocol and bioinformatic analysis for robust detection of chromatin loops and stripes.

Karolina Buka, Zofia Parteka-Tojek, Abhishek Agarwal

|Mar 31, 2024
A systematic analyses of different bioinformatics pipelines for genomic data and its impact on deep learning models for chromatin loop prediction.

Anup Kumar Halder, Abhishek Agarwal, Karolina Jodkowska

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Frequent Collaborators

5 joint publications

Dariusz Plewczynski

3 joint publications

Abhishek Agarwal

3 joint publications

Krzysztof H Banecki

3 joint publications

Piotr J Górski