Yijun Ruan

9PUBLICATIONS

102CO-AUTHORS

Genome structure and regulationData structures and algorithmsCancer cell biologyCell and nuclear divisionGene expression (incl. microarray and other genome-wide approaches)

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Publications (9)

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|Jun 22, 2026

RepliSage: a stochastic graph-based framework for 3D chromatin modeling across the cell cycle.

|Apr 08, 2026

Simultaneous modeling of chromatin conformation changes from multiple single-cell interaction maps with ChromMovie.

Krzysztof H Banecki, Haoxi Chai, Yijun Ruan

|Jan 13, 2026

Interplay between cohesin and RNA polymerase II in regulating chromatin interactions and gene transcription.

Minji Kim, Ping Wang, Patricia A Clow

|Dec 17, 2025

An integrated view of the structure and function of the human 4D nucleome.

Job Dekker, Betul Akgol Oksuz, Yang Zhang

|Aug 21, 2025

Stereo-cell: Spatial enhanced-resolution single-cell sequencing with high-density DNA nanoball-patterned arrays.

Sha Liao, Xiaoxi Zhou, Chuanyu Liu

|Jun 06, 2025

ChromMovie: A Molecular Dynamics Approach for Simultaneous Modeling of Chromatin Conformation Changes from Multiple Single-Cell Hi-C Maps.

Krzysztof H Banecki, Haoxi Chai, Yijun Ruan

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Frequent Collaborators

Dariusz Plewczynski

Krzysztof H Banecki

Haoxi Chai

Xiaotao Wang

Piotr J Górski

Chia-Lin Wei

Minji Kim

Karolina Buka

Sevastianos Korsak

Joanna Borkowska

Frequent Collaborators

Dariusz Plewczynski

Krzysztof H Banecki

Haoxi Chai

Xiaotao Wang