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Eleonora Rachtman

6PUBLICATIONS

8CO-AUTHORS

Microbial taxonomyPhylogeny and comparative analysisComputational ecology and phylogeneticsEpigenetics (incl. genome methylation and epigenomics)Gene expression (incl. microarray and other genome-wide approaches)

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Publications (6)

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|Feb 06, 2026

Deconvolving Phylogenetic Distance Mixtures.

Shayesteh Arasti, Ali Osman Berk Şapcı, Eleonora Rachtman

|Oct 13, 2025

Machine Learning Enables Alignment-Free Distance Calculation and Phylogenetic Placement Using k-Mer Frequencies.

Eleonora Rachtman, Yueyu Jiang, Siavash Mirarab

|Mar 16, 2024

CONSULT-II: accurate taxonomic identification and profiling using locality-sensitive hashing.

Ali Osman Berk Şapcı, Eleonora Rachtman, Siavash Mirarab

|Nov 15, 2021

Estimating repeat spectra and genome length from low-coverage genome skims with RESPECT.

Shahab Sarmashghi, Metin Balaban, Eleonora Rachtman

|Aug 11, 2021

CONSULT: accurate contamination removal using locality-sensitive hashing.

Eleonora Rachtman, Vineet Bafna, Siavash Mirarab

|Jan 17, 2020

The impact of contaminants on the accuracy of genome skimming and the effectiveness of exclusion read filters.

Eleonora Rachtman, Metin Balaban, Vineet Bafna

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Frequent Collaborators

4 joint publications

Siavash Mirarab

2 joint publications

Vineet Bafna

2 joint publications

Ali Osman Berk Şapcı

1 joint publications

Shahab Sarmashghi

1 joint publications

Metin Balaban

1 joint publications

Behrouz Touri

1 joint publications

Shayesteh Arasti

1 joint publications

Mohammed El-Kebir

Frequent Collaborators

4 joint publications

Siavash Mirarab

2 joint publications

Vineet Bafna

2 joint publications

Ali Osman Berk Şapcı

1 joint publications

Shahab Sarmashghi

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