Tsukasa Nakamura

8PUBLICATIONS
177CO-AUTHORS
Bioinformatic methods developmentStructural properties of condensed matterStructural biology (incl. macromolecular modelling)Proteomics and metabolomicsBiological network analysis
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Publications (8)

|May 18, 2026
On the state of protein function prediction: a report on the fourth CAFA challenge.

|Nov 24, 2025
Blind prediction of complex water and ion ensembles around RNA in CASP16.

Rachael C Kretsch, Elisa Posani, Eugene F Baulin

|Nov 08, 2025
Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16.

Rachael C Kretsch, Elisa Posani, Eugene F Baulin

|Feb 19, 2025
Protein Data Bank Japan: Improved tools for sequence-oriented analysis of protein structures.

Gert-Jan Bekker, Chioko Nagao, Matsuyuki Shirota

|Jan 21, 2025
NuFold: end-to-end approach for RNA tertiary structure prediction with flexible nucleobase center representation.

Yuki Kagaya, Zicong Zhang, Nabil Ibtehaz

|Dec 08, 2023
DeepMainmast: integrated protocol of protein structure modeling for cryo-EM with deep learning and structure prediction.

Genki Terashi, Xiao Wang, Devashish Prasad

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Frequent Collaborators

7 joint publications

Daisuke Kihara

4 joint publications

Genki Terashi

4 joint publications

Yuki Kagaya

2 joint publications

Xiao Wang