Ali Sina Booeshaghi

13PUBLICATIONS
73CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Genomics and transcriptomicsFormal methods for softwareSequence analysisInformation extraction and fusion
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Publications (13)

|Dec 03, 2025
Determining gene specificity from multivariate single-cell RNA sequencing data.

Nikhila P Swarna, A Sina Booeshaghi, Elisabeth Rebboah

|Jul 29, 2024
Long-read sequencing transcriptome quantification with lr-kallisto.

Rebekah K Loving, Delaney K Sullivan, A Sina Booeshagi

|Jul 29, 2024
Characterization of spatial homogeneous regions in tissues with concordex.

Kayla C Jackson, A Sina Booeshaghi, Ángel Gálvez-Merchán

|Apr 15, 2024
The impact of package selection and versioning on single-cell RNA-seq analysis.

Joseph M Rich, Lambda Moses, Pétur Helgi Einarsson

|Apr 05, 2024
A machine-readable specification for genomics assays.

Ali Sina Booeshaghi, Xi Chen, Lior Pachter

|Jan 12, 2024
Quantifying orthogonal barcodes for sequence census assays.

A Sina Booeshaghi, Kyung Hoi Joseph Min, Jase Gehring

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