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Maria Carilli

7PUBLICATIONS

26CO-AUTHORS

Statistical mechanics, physical combinatorics and mathematical aspects of condensed matterGene expression (incl. microarray and other genome-wide approaches)Sensory processes, perception and performanceGenomics and transcriptomicsSequence analysis

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Publications (7)

Sort by Publication Date:

|Apr 17, 2026

The Rayleigh Quotient and Contrastive Principal Component Analysis II.

|Apr 10, 2026

Hybrid crosses reveal a cell-type-specific landscape of mouse regulatory variation.

Ryan Weber, Maria Carilli, Elisabeth Rebboah

|Dec 03, 2025

The Rayleigh Quotient and Contrastive Principal Component Analysis I.

Maria Carilli, Kayla Jackson, Lior Pachter

|Nov 24, 2025

<i>Monod</i>: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell sequencing data.

Gennady Gorin, Tara Chari, Maria Carilli

|Nov 07, 2025

Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell sequencing data.

Gennady Gorin, Tara Chari, Maria Carilli

|Jul 25, 2024

Biophysical modeling with variational autoencoders for bimodal, single-cell RNA sequencing data.

Maria Carilli, Gennady Gorin, Yongin Choi

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Frequent Collaborators

7 joint publications

Lior Pachter

3 joint publications

Tara Chari

3 joint publications

Gennady Gorin

2 joint publications

Kayla Jackson

2 joint publications

Ali Mortazavi

1 joint publications

Laura Luebbert

1 joint publications

Delaney K Sullivan

1 joint publications

Kristján Eldjárn Hjörleifsson

1 joint publications

Alexander Viloria Winnett

1 joint publications

Yongin Choi

Frequent Collaborators

7 joint publications

Lior Pachter

3 joint publications

Tara Chari

3 joint publications

Gennady Gorin

2 joint publications

Kayla Jackson

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