Karel Břinda
8PUBLICATIONS
25CO-AUTHORS
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Publications (8)
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|Jan 16, 2026
Novel genes arise from genomic deletions across the bacterial tree of life.Arya Kaul, Fernando Rossine, Karel Břinda
|Jan 16, 2026
FroM Superstring to Indexing: a space-efficient index for unconstrained k-mer sets using the Masked Burrows-Wheeler Transform (MBWT).Ondřej Sladký, Pavel Veselý, Karel Břinda
|Apr 09, 2025
Efficient and robust search of microbial genomes via phylogenetic compression.Karel Břinda, Leandro Lima, Simone Pignotti
|May 03, 2023
Efficient and Robust Search of Microbial Genomes via Phylogenetic Compression.Karel Břinda, Leandro Lima, Simone Pignotti
|Jan 26, 2022
SARS-CoV-2 epidemic after social and economic reopening in three U.S. states reveals shifts in age structure and clinical characteristics.Nathan B Wikle, Thu Nguyen-Anh Tran, Bethany Gentilesco
|Apr 07, 2021
Simplitigs as an efficient and scalable representation of de Bruijn graphs.Karel Břinda, Michael Baym, Gregory Kucherov
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Frequent Collaborators
4 joint publications
Michael Baym
3 joint publications
Gregory Kucherov
2 joint publications
William P Hanage
2 joint publications
Zamin Iqbal
2 joint publications
Rayan Chikhi
2 joint publications
Natalia Quinones-Olvera
1 joint publications
Fernando Rossine
1 joint publications
Yonatan H Grad
1 joint publications
Justin O'Grady
1 joint publications
Tong Zhang
