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Dima Kozakov

25PUBLICATIONS

79CO-AUTHORS

Experimental methods in fluid flow, heat and mass transferComputational chemistryPowder and particle technologyBiomolecular modelling and designComputational physiology

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Publications (25)

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|Mar 04, 2026

Bias in the AlphaFold3 prediction of ligand-induced domain motion in enzymes.

Hao Yu, Ayse A Bekar-Cesaretli, Maria Lazou

|Oct 20, 2025

Modeling Protein-Protein and Protein-Ligand Interactions by the ClusPro Team in CASP16.

Ryota Ashizawa, Sergei Kotelnikov, Omeir Khan

|Feb 20, 2025

Identification of actionable targeted protein degradation effector sites through Site-specific Ligand Incorporation-induced Proximity (SLIP).

Zhangping Xiao, Efthymios Spyridon Gavriil, Fangyuan Cao

|Nov 20, 2024

Predicting multiple conformations of ligand binding sites in proteins suggests that AlphaFold2 may remember too much.

Maria Lazou, Omeir Khan, Thu Nguyen

|Dec 11, 2023

MHC-Fine: Fine-tuned AlphaFold for Precise MHC-Peptide Complex Prediction.

Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko

|Oct 31, 2023

Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment.

Marc F Lensink, Guillaume Brysbaert, Nessim Raouraoua

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Frequent Collaborators

15 joint publications

Sandor Vajda

6 joint publications

Dzmitry Padhorny

4 joint publications

Adrian Whitty

3 joint publications

Charles W Christoffer

3 joint publications

Yang Shen

3 joint publications

Marc F Lensink

3 joint publications

Paul A Bates

3 joint publications

Shan Chang

3 joint publications

Cezary Czaplewski

3 joint publications

Sheng-You Huang

Frequent Collaborators

15 joint publications

Sandor Vajda

6 joint publications

Dzmitry Padhorny

4 joint publications

Adrian Whitty

3 joint publications

Charles W Christoffer

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