Fergus Shanahan

20PUBLICATIONS
77CO-AUTHORS
Food properties (incl. characteristics and health benefits)Reinforcement learningPredictive and prognostic markersInnate immunityPsychosocial aspects of childbirth and perinatal mental health
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Publications (20)

|Apr 22, 2026
Gut microbiome features associated with Bifidobacterium colonization predict personalized probiotic persistence patterns.

|Nov 14, 2025
Exploring the concept of bacterial memory.

Killian Scanlon, Fergus Shanahan, R Paul Ross

|Jan 15, 2025
Host-microbe multi-omics and succinotype profiling have prognostic value for future relapse in patients with inflammatory bowel disease.

Jill O'Sullivan, Shriram Patel, Gabriel E Leventhal

|Sep 07, 2024
Cross-Cohort Gut Microbiome Signatures of Irritable Bowel Syndrome Presentation and Treatment.

Junhui Li, Tarini Shankar Ghosh, Elke Arendt

|May 25, 2023
Detailed mapping of Bifidobacterium strain transmission from mother to infant via a dual culture-based and metagenomic approach.

Conor Feehily, Ian J O'Neill, Calum J Walsh

|Feb 26, 2023
Interpersonal variability of the human gut virome confounds disease signal detection in IBD.

Stephen R Stockdale, Andrey N Shkoporov, Ekaterina V Khokhlova

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Frequent Collaborators

4 joint publications

Paul W O'Toole

3 joint publications

Tarini Shankar Ghosh

3 joint publications

Colin Hill

2 joint publications

Rachel S Fitzgerald