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Dominic Rufa

4PUBLICATIONS
20CO-AUTHORS
MechanobiologyBiomolecular modelling and designComputational chemistry
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Journal

Publications (4)

Sort by Publication Date:
|Jun 22, 2026
MAHLER: Integrating Metadynamics and Inverse Folding to Predict Antibody-Antigen Kinetics.

|Jan 20, 2025
Fine-tuning molecular mechanics force fields to experimental free energy measurements.

Dominic Rufa, Joshua Fass, John D Chodera

|Mar 22, 2023
Identifying and overcoming the sampling challenges in relative binding free energy calculations of a model protein:protein complex.

Ivy Zhang, Dominic A Rufa, Iván Pulido

|Nov 09, 2022
End-to-end differentiable construction of molecular mechanics force fields.

Yuanqing Wang, Josh Fass, Benjamin Kaminow

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Frequent Collaborators

3 joint publications

John D Chodera

2 joint publications

Ivy Zhang

2 joint publications

Iván Pulido

2 joint publications

Mike Henry

2 joint publications

Joshua Fass

1 joint publications

Laura E Rosen

1 joint publications

Kevin Hauser

1 joint publications

Sukrit Singh

1 joint publications

Yuanqing Wang

1 joint publications

Benjamin Kaminow

Frequent Collaborators

3 joint publications

John D Chodera

2 joint publications

Ivy Zhang

2 joint publications

Iván Pulido

2 joint publications

Mike Henry