Kei-Ichi Okazaki

20PUBLICATIONS
40CO-AUTHORS
Adversarial machine learningNanoelectronicsChemical thermodynamics and energeticsNanoelectromechanical systemsStructural biology (incl. macromolecular modelling)
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Publications (20)

|Oct 01, 2026
Enhanced Sampling of Protein Conformations in AlphaFold3 with Repulsive Bias in the Diffusion Generative Model.

|Apr 03, 2026
Conformational Dynamics of Na+-Pumping NADH-Quinone Oxidoreductase during Na+ Translocation from AlphaFold-Facilitated Markov State Modeling.

Takehito Seki, Jun Ohnuki, Kei-Ichi Okazaki

|Mar 02, 2026
Deep learning of committor for ion dissociation and interpretable analysis of solvent effects using atom-centered symmetry functions.

Kenji Okada, Kazushi Okada, Kei-Ichi Okazaki

|Feb 12, 2026
The redox driven Na+-pumping mechanism in Vibrio cholerae NADH-quinone oxidoreductase relies on dynamic conformational changes.

Moe Ishikawa-Fukuda, Takehito Seki, Jun-Ichi Kishikawa

|Nov 21, 2025
Membrane Constriction by Dynamin through GTP-Driven Conformational Changes from Coarse-Grained Molecular Dynamics Simulations.

Md Iqbal Mahmood, Shintaroh Kubo, Hiroshi Noguchi

|Jun 27, 2025
Rotation-Direction-Dependent Mechanism of the Inhibitor Protein IF1 for Mitochondrial ATP Synthase from Atomistic Simulations.

Ryohei Kobayashi, Kei-Ichi Okazaki

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Frequent Collaborators

4 joint publications

Jun Ohnuki

3 joint publications

Takayuki Kato

3 joint publications

Atsuko Yamashita

3 joint publications

Jun-Ichi Kishikawa