Niema Moshiri

19PUBLICATIONS
47CO-AUTHORS
Medical virologyProgramming languagesEpigenetics (incl. genome methylation and epigenomics)Open accessSequence analysis
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Publications (19)

|Sep 19, 2026
MultiVirusConsensus: an accurate and efficient open-source pipeline for identification and consensus sequence generation of multiple viruses from mixed samples.

|Sep 08, 2026
QPL-enabled HTSlib library: accelerating sequence file compression using Intel IAA.

|Aug 20, 2025
Epigenetic motifs distinguishing endogenous from exogenous retroviral integrants.

Sarah LaMere, Hanbei Xiong, Wei Wang

|Mar 20, 2025
CompactTree: a lightweight header-only C++ library and Python wrapper for ultra-large phylogenetics.

Niema Moshiri

|Jan 10, 2024
ViralWasm: a client-side user-friendly web application suite for viral genomics.

Daniel Ji, Robert Aboukhalil, Niema Moshiri

|Oct 24, 2023
Hidden evolutionary constraints dictate the retention of coronavirus accessory genes.

Stephen A Goldstein, Teagan M Feeley, Kristina M Babler

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Frequent Collaborators

2 joint publications

Wout Bittremieux

2 joint publications

Jonathan Pekar

2 joint publications

Michael Worobey

2 joint publications

Joel O Wertheim