Niema Moshiri

17PUBLICATIONS
44CO-AUTHORS
Epigenetics (incl. genome methylation and epigenomics)Open accessSequence analysisBiological adaptationInstruments and techniques
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Publications (17)

|Aug 20, 2025
Epigenetic motifs distinguishing endogenous from exogenous retroviral integrants.

Sarah LaMere, Hanbei Xiong, Wei Wang

|Mar 20, 2025
CompactTree: a lightweight header-only C++ library and Python wrapper for ultra-large phylogenetics.

Niema Moshiri

|Jan 10, 2024
ViralWasm: a client-side user-friendly web application suite for viral genomics.

Daniel Ji, Robert Aboukhalil, Niema Moshiri

|Oct 24, 2023
Hidden evolutionary constraints dictate the retention of coronavirus accessory genes.

Stephen A Goldstein, Teagan M Feeley, Kristina M Babler

|Jun 27, 2023
Accelerating open modification spectral library searching on tensor core in high-dimensional space.

Jaeyoung Kang, Weihong Xu, Wout Bittremieux

|May 12, 2023
ViralConsensus: a fast and memory-efficient tool for calling viral consensus genome sequences directly from read alignment data.

Niema Moshiri

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Frequent Collaborators

2 joint publications

Wout Bittremieux

2 joint publications

Jonathan Pekar

2 joint publications

Michael Worobey

2 joint publications

Joel O Wertheim