Samuel M Nicholls
8PUBLICATIONS
150CO-AUTHORS
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Publications (8)
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|Nov 04, 2024
A phylogenetics and variant calling pipeline to support SARS-CoV-2 genomic epidemiology in the UK.Rachel Colquhoun, Áine O'Toole, Verity Hill
|Mar 24, 2023
Genomics-informed outbreak investigations of SARS-CoV-2 using civet.Áine O'Toole, Verity Hill, Ben Jackson
|Feb 16, 2022
Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package.Emma J Griffiths, Ruth E Timme, Catarina Inês Mendes
|Jul 02, 2021
CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance.Samuel M Nicholls, Radoslaw Poplawski, Matthew J Bull
|Mar 10, 2021
SARS-CoV-2 within-host diversity and transmission.Katrina A Lythgoe, Matthew Hall, Luca Ferretti
|Jan 14, 2021
On the complexity of haplotyping a microbial community.Samuel M Nicholls, Wayne Aubrey, Kurt De Grave
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Frequent Collaborators
5 joint publications
Tom Connor
3 joint publications
Nick Loman
3 joint publications
Rachel Colquhoun
3 joint publications
Áine O'Toole
3 joint publications
Andrew Rambaut
3 joint publications
John T McCrone
2 joint publications
Verity Hill
2 joint publications
Louis du Plessis
2 joint publications
Oliver G Pybus
2 joint publications
Jordan Ashworth
