NMR solution structure of the inserted domain of human leukocyte function associated antigen-1
G B Legge1, R W Kriwacki, J Chung
1Department of Molecular Biology MB2 and Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA, 92037, USA.
Insights
Leukocyte function-associated antigen-1 (LFA-1) activation involves its I-domain, but cation roles are debated. NMR reveals inherent flexibility in the LFA-1 I-domain C-terminus, suggesting cations may bridge ligands rather than directly altering conformation.
Area of Science:
- Structural Biology
- Immunology
- Biochemistry
Background:
- Leukocyte function-associated antigen-1 (LFA-1) interaction with intercellular adhesion molecules is crucial for leukocyte adhesion.
- LFA-1 activation, mediated by its I-domain, is an early step in leukocyte adhesion, but the roles of conformational changes and divalent cations remain debated.
Purpose of the Study:
- To investigate the structural basis of LFA-1 activation and the role of divalent cations in mediating intercellular adhesion molecule binding.
- To resolve discrepancies in the literature regarding conformational changes in the LFA-1 I-domain and cation involvement.
Main Methods:
- Nuclear Magnetic Resonance (NMR) spectroscopy was employed to determine the solution structure of the Mg(2+) complex of the LFA-1 I-domain.
- Model-based approach to nuclear Overhauser enhancement spectroscopy peak assignment was utilized.
- NMR relaxation data were analyzed to assess the flexibility of the C-terminal region.
Main Results:
- The solution structure of the LFA-1 I-domain is similar to published X-ray structures, but the C-terminal region exhibits distinct structural features and significant flexibility.
- NMR relaxation data indicate breathing or segmental motion in the C-terminal helix, suggesting inherent conformational plasticity.
- Divalent cations do not appear to directly mediate a conformational change altering ligand affinity; instead, they may act as bridges or modulate the binding surface charge.
Conclusions:
- The inherent flexibility of the LFA-1 I-domain's C-terminal region can explain conformational diversity observed in crystal structures.
- The C-terminal helix possesses the potential to adopt alternative conformations, potentially influenced by ligand presence.
- Divalent cations likely play a role in ligand binding beyond direct conformational induction, possibly through bridging or charge modulation.
Abstract:
The interaction between the leukocyte function-associated antigen-1 (LFA-1) and the intercellular adhesion molecule is thought to be mediated primarily via the inserted domain (I-domain) in the alpha-subunit. The activation of LFA-1 is an early step in triggering the adhesion of leukocytes to target cells decorated with intercellular adhesion molecules. There is some disagreement in the literature over the respective roles of conformational changes in the I-domain and of divalent cations (Mg(2+), Mn(2+)) in the activation of LFA-1 for intercellular adhesion molecule binding. X-ray crystallographic structures of the I-domains of LFA-1 and Mac-1 in the presence and absence of cations show structural differences in the C-terminal alpha-helix; this change was proposed to represent the active and inactive conformations of the I-domain. However, more recent X-ray results have called this proposal into question. The solution structure of the Mg(2+) complex of the I-domain of LFA-1 has been determined by NMR methods, using a model-based approach to nuclear Overhauser enhancement spectroscopy peak assignment. The protein adopts the same structure in solution as that of the published I-domain X-ray structures, but the C-terminal region, where the X-ray structures are most different from each other, is different again in the solution structures. The secondary structure of this helix is well formed, but NMR relaxation data indicate that there is considerable flexibility present, probably consisting of breathing or segmental motion of the helix. The conformational diversity seen in the various X-ray structures could be explained as a result of the inherent flexibility of this C-terminal region and as a result of crystal contacts. Our NMR data are consistent with a model where the C-terminal helix has the potential flexibility to take up alternative conformations, for example, in the presence and absence of the intercellular adhesion molecule ligand. The role of divalent cations appears from our results not to be as a direct mediator of a conformational change that alters affinity for the ligand. Rather, the presence of the cation appears to be involved in some other way in ligand binding, perhaps by acting as a bridge to the ligand and by modulation of the charge of the binding surface.
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