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Unusual biophysics of immune signaling-related intrinsically disordered proteins
1SignaBlok Inc.; Shrewsbury, MA USA.
Insights
Intrinsically disordered proteins (IDPs) in immune receptor signaling exhibit unique dimerization and membrane binding behaviors. These findings challenge traditional protein biophysics and offer new insights into cell signaling mechanisms.
Area of Science:
- Biophysics
- Molecular Biology
- Cell Signaling
Background:
- Intrinsically disordered (ID) regions are crucial in cell signaling and often found in cytoplasmic segments of plasma membrane proteins.
- Signaling subunits of immune receptors, such as T cell receptor and B cell receptor, contain ID regions within their cytoplasmic domains.
- These domains feature immunoreceptor tyrosine-based activation motifs (ITAMs) critical for signal transduction.
Purpose of the Study:
- To characterize the biophysical properties of intrinsically disordered proteins (IDPs) in immune receptor signaling.
- To investigate novel phenomena associated with these IDPs, including dimerization and membrane interactions.
- To re-evaluate fundamental paradigms in protein biophysics and receptor signaling.
Main Methods:
- Characterization of cytoplasmic domains of immune receptor signaling subunits as intrinsically disordered proteins (IDPs).
- Biophysical studies to analyze dimerization properties (specific, fast/slow equilibrium) and interactions with folded proteins.
- Investigation of dual-mode binding to model membranes with varying lipid bilayer stability.
Main Results:
- Identified cytoplasmic domains of immune receptor signaling subunits as a novel class of IDPs.
- Observed specific dimerization of IDPs, with varied equilibrium kinetics.
- Demonstrated no disorder-to-order transition upon dimerization or interaction with folded partners.
- Revealed dual binding modes to lipid bilayers, dependent on membrane stability.
Conclusions:
- Intrinsically disordered proteins in immune receptor signaling exhibit unique biophysical properties.
- These properties challenge conventional understanding of protein structure-function relationships.
- Findings provide new perspectives on the molecular mechanisms underlying immune receptor signal transduction.
Abstract:
Intrinsically disordered (ID) regions, the regions that lack a well-defined three-dimensional structure under physiological conditions, are preferentially located in the cytoplasmic segments of plasma membrane proteins, many of which are known to be involved in cell signaling. This is in line with our studies that demonstrated that cytoplasmic domains of signaling subunits of immune receptors, including those of ζ, CD3ε, CD3δ and CD3γ chains of T cell receptor, Igα and Igβ chains of B cell receptor as well as the Fc receptor γ chain represent a novel class of ID proteins (IDPs). The domains all have one or more copies of an immunoreceptor tyrosine-based activation motif, tyrosine residues of which are phosphorylated upon receptor engagement in an early and obligatory event in the signaling cascade. Our studies of these IDPs revealed several unusual biophysical phenomena, including (1) the specific dimerization of disordered protein molecules, (2) the fast and slow dimerization equilibrium, depending on the protein, (3) no disorder-to-order transition and the lack of significant chemical shift and peak intensity changes upon dimerization or interaction with a well-folded partner protein and (4) the dual mode of binding to model membranes (with and without folding), depending on the lipid bilayer stability. Here, I highlight several of these studies that not only facilitate a rethinking process of the fundamental paradigms in protein biophysics but also open new perspectives on the molecular mechanisms involved in receptor signaling.
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