Biological characterization of paired human immunodeficiency virus type 1 isolates from blood and cerebrospinal fluid
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Updated: Aug 8, 2026

Amplifying and Quantifying HIV-1 RNA in HIV Infected Individuals with Viral Loads Below the Limit of Detection by Standard Clinical Assays
Published on: September 26, 2011
1Department of Virology, Karolinska Institute, Stockholm.
Insights
Researchers isolated human immunodeficiency virus type 1 (HIV-1) from blood and cerebrospinal fluid (CSF) of infected individuals. Variant viruses with distinct characteristics were found in the blood and CSF of the same patient.
Area of Science:
- Virology
- Neuroscience
- Immunology
Background:
- Human immunodeficiency virus type 1 (HIV-1) infection can lead to neurological and psychiatric complications.
- The presence and characteristics of HIV-1 in cerebrospinal fluid (CSF) are not fully understood.
- Understanding viral variants in different bodily fluids is crucial for disease progression and treatment.
Purpose of the Study:
- To isolate and characterize HIV-1 from the blood and CSF of patients with varying HIV-1 infection severity.
- To investigate the biological differences between HIV-1 isolates from blood and CSF.
- To explore the relationship between viral variants and neurological/psychiatric complications.
Main Methods:
- Virus isolation from blood, CSF, and brain tissue.
- Replication studies in peripheral blood mononuclear cells, monocytes, and H9 cell lines.
- Analysis of viral characteristics including cytopathic effect and protein profiles using radioimmunoprecipitation.
Main Results:
- HIV-1 was isolated from blood and CSF of eight subjects and brain tissue of one AIDS patient.
- Most isolates replicated in peripheral blood mononuclear cells and monocytes.
- Isolates from late-stage HIV infection and CSF showed distinct replication capacities in H9 cells compared to early-stage blood isolates.
- Paired blood and CSF isolates exhibited different biological characteristics.
Conclusions:
- Variant HIV-1 viruses with distinct biological properties can be isolated from the blood and CSF of the same patient.
- These viral variants may contribute to the neurological and psychiatric manifestations of HIV-1 infection.
- Further research is needed to understand the implications of viral diversity in different compartments for HIV-1 pathogenesis.
Abstract:
Virus has been isolated from the blood and cerebrospinal fluid (CSF) of eight subjects with varying severity of human immunodeficiency virus type 1 (HIV-1) infection and from the frontal lobe of one patient with AIDS. The five patients with AIDS-related complex (ARC) and AIDS also showed neurological/psychiatric complications. With the exception of one isolate from the CSF of an asymptomatic carrier, all isolates replicated in peripheral blood mononuclear cells and monocytes after cell-free transmission. Isolates obtained from the blood of patients in late stages of HIV infection replicated in 3 (of 4) cases in H9 cells, whereas none of the blood isolates from patients in the early stages did so. The capacity of CSF isolates to replicate in H9 cells was low (only 2 of 12). Paired virus isolates from blood and CSF of the same patient could be distinguished by their replicative capacity in different cell lines, type of cytopathic effect, and protein profile as tested by radioimmunoprecipitation. The results indicate that variant viruses with distinct biological characteristics may be isolated from the blood and CSF of the same patient.
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