Structural characterization of a soluble and partially folded class I major histocompatibility heavy chain/beta 2m

M Bouvier1, D C Wiley

  • 1Department of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts 02138, USA.

Insights

Class I MHC heavy chain folding requires assembly with beta 2 microglobulin. This study characterizes a soluble intermediate, revealing unstable peptide-binding domains akin to a molten globule state, crucial for MHC maturation.

Area of Science:

  • Immunology
  • Structural Biology
  • Biochemistry

Background:

  • Class I Major Histocompatibility (MHC) heavy chain (HC) assembly with beta 2 microglobulin (beta 2m) is critical for peptide binding and cell surface expression.
  • This process occurs in the endoplasmic reticulum (ER) and involves chaperones and other proteins.

Purpose of the Study:

  • To biochemically and structurally characterize a soluble Class I MHC heavy chain (B*0702)/beta 2m heterodimer.
  • To investigate the folding state and properties of this peptide-free intermediate.

Main Methods:

  • Biochemical characterization of a soluble heterodimer.
  • Structural analysis of the folding intermediate.

Main Results:

  • A soluble B*0702 heavy chain/beta 2 microglobulin heterodimer, apparently peptide-free, was characterized.
  • The peptide binding domains (alpha 1 and alpha 2) of this intermediate exhibit instability, resembling a molten globule state.
  • This partially folded state suggests stabilization by ER-associated chaperones and proteins.

Conclusions:

  • The characterized soluble heterodimer represents a folding intermediate of Class I MHC molecules.
  • Its molten globule-like properties provide insights into protein-assisted folding mechanisms in the ER.
  • This intermediate is a valuable tool for studying Class I MHC folding and peptide binding processes.

Related Concept Videos

Protein Folding01:22

Protein Folding

Overview
Gene Families01:57

Gene Families

Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
Protein Complex Assembly02:41

Protein Complex Assembly

Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types.  Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Multi-pass Transmembrane Proteins and β-barrels01:09

Multi-pass Transmembrane Proteins and β-barrels

In multi-pass transmembrane proteins, the polypeptide chain crosses the membrane more than once. The transmembrane polypeptide chain either forms an α-helix or β-strand structure. α-Helix containing multi-pass transmembrane proteins are ubiquitous, whereas β-strand containing ones are mainly found in gram-negative bacteria, mitochondria, and chloroplasts.
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
Structure of Cadherins01:25

Structure of Cadherins

The cadherins were one of the first cell adhesion molecules discovered; the term “cadherins”   is based on their calcium-dependent adhering properties. The first cadherins discovered on the epithelial, neuronal, and placental cells were named E-cadherin, P-cadherin, and N-cadherin, respectively. These classical cadherins share sequence and structural similarities. Other cadherins, including those involved in cell signaling, are grouped into non-classical cadherins. This diversity of cadherins...