从分子到模块化细胞生物学
L H Hartwell1, J J Hopfield, S Leibler
1Fred Hutchinson Cancer Center, Seattle, Washington 98109, USA.
Nature
|December 11, 1999
概括
细胞功能依赖于分子模块. 整合实验和理论方法,包括合成科学和进化见解,是理解它们的结构和行为的关键.
科学领域:
- 细胞生物学 细胞生物学
- 系统生物学 系统生物学
- 生物物理学的生物物理.
背景情况:
- 细胞功能是由复杂的分子模块执行的.
- 了解这些模块需要整合各种分析方法.
- 当前的方法往往缺乏对模块动态的整体观点.
研究的目的:
- 探索管理分子模块结构和行为的一般原则.
- 倡导细胞生物学研究的跨学科方法.
- 突出合成科学和进化约束的作用.
主要方法:
- 细胞过程的现象学分析.
- 对相互作用物种的分子层次的研究.
- 工程和计算机科学原则的整合.
- 加强实验数据和理论模型之间的相互作用.
- 考虑模块设计上的进化约束.
主要成果:
- 确定了结合多个科学学科的必要性,以获得全面的理解.
- 他强调了合成科学的潜力,以揭示基本原则.
- 突出了进化压力在塑造分子模块中的重要性.
- 证明了整合实验和理论框架的价值.
结论:
- 结合实验,理论,计算和进化观点的统一方法对于破译分子模块功能至关重要.
- 未来的研究应该促进实验细胞生物学与工程和计算机科学等领域之间的更强大的合作.
- 了解进化背景为细胞模块的设计和强度提供了关键的见解.
相关概念视频
Eukaryotic Compartmentalizations
One of the distinguishing features of eukaryotic cells is that they contain membrane-bound organelles, such as the nucleus and mitochondria, that carry out specialized functions. Since biological membranes are only selectively permeable to solutes, they help create a compartment with controlled conditions inside an organelle. These microenvironments are tailored to the organelle's specific functions and help isolate them from the surrounding cytosol.
For example, lysosomes in the animal cells...
For example, lysosomes in the animal cells...
Eukaryotic Compartmentalization
One of the distinguishing features of eukaryotic cells is that they contain membrane-bound organelles, such as the nucleus and mitochondria, that carry out specialized functions. Since biological membranes are only selectively permeable to solutes, they help create a compartment with controlled conditions inside an organelle. These microenvironments are tailored to the organelle's specific functions and help isolate them from the surrounding cytosol.
For example, lysosomes in the animal cells...
For example, lysosomes in the animal cells...
IP3/DAG Signaling Pathway
Membrane lipids such as phosphatidylinositol (PI) are precursors for several membrane-bound and soluble second messengers. Specific kinases phosphorylate PI and produce phosphorylated inositol phospholipids. One such inositol phospholipids are the phosphatidylinositol-4,5 bisphosphate [PI(4,5)P2], present in the inner half of the lipid bilayer. Upon ligand binding, GPCR stimulates Gq proteins to turn on phospholipase Cꞵ. Activated phospholipase Cꞵ cleaves PI(4,5)P2 and produces two-second...
Calmodulin-dependent Signaling
Calmodulin (CaM) is a calcium-binding protein in eukaryotes that controls various calcium-regulated cellular processes. It has four calcium-binding sites that bind calcium to form the calcium-calmodulin ( Ca2+-CaM) complex. GPCR stimulation increases the calcium levels in the cells that bind to CaM and induces a conformational change.
The Ca2+-CaM complex does not have enzymatic activity by itself. Instead, the complex binds downstream target proteins, including membrane proteins or enzymes,...
The Ca2+-CaM complex does not have enzymatic activity by itself. Instead, the complex binds downstream target proteins, including membrane proteins or enzymes,...
Subcellular Fractionation
The homogenate obtained after cell lysis contains various membrane-bound organelles that can be further separated into pure fractions by subcellular fractionation. These isolates are used to study specific cellular components, analyze localized protein activity, and are even employed in diagnostics. Fractionation is typically achieved using centrifugation methods, the most common being density-gradient and differential centrifugation.
Differential Centrifugation
Differential centrifugation is...
Differential Centrifugation
Differential centrifugation is...
Molecular Factors Affecting Cell Division
Several external and internal factors influence the initiation and inhibition of cell division. For instance, the death of nearby cells or the release of human growth hormone (hGH) promotes cell division. In contrast, lack of hGH or crowding of cells can inhibit cell division.
Several proteins function as internal regulators to ensure each cell cycle stage is completed faithfully before proceeding to the next. Regulator molecules may act directly or influence the activity or production of other...
Several proteins function as internal regulators to ensure each cell cycle stage is completed faithfully before proceeding to the next. Regulator molecules may act directly or influence the activity or production of other...


