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相关概念视频

ABC Transporters: Exporter01:31

ABC Transporters: Exporter

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ATP-binding cassette or ABC transporter is the largest superfamily of integral membrane proteins. The transporters have transmembrane-binding domains (TMDs) and nucleotide-binding domains (NBDs). The TMDs are specific to their substrates, whereas the NBDs are similar to engines that complete ATP hydrolysis to complete the substrate transport. They can be full transporters consisting of two TMDs and NBDs, half transporters with one TMD and NBD, while some encoded with a single TMD or NBD are...
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Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
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The nucleus restricts several proteins within and allows others to pass. The restricted proteins possess a nuclear retention sequence or NRS, anchoring them to the nuclear lamins and preventing their transport to the cytosol. The non-restricted proteins, after their synthesis, are transported to their site of action, such as the cytosol or other organelles, with the help of nuclear export signals or NES.
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A eukaryotic cell can have up to three different types of genetic systems: nuclear, mitochondrial, and chloroplast. During evolution, organelles have exported many genes to the nucleus; this transfer is still ongoing in some plant species. Approximately 18% of the Arabidopsis thaliana nuclear genome is thought to be derived from the chloroplast’s cyanobacterial ancestor, and around 75% of the yeast genome derived from the mitochondria’s bacterial ancestor. This export has occurred...
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对于ABC出口者MsbA的未开发的核酸结合模式

Hundeep Kaur1, Bárbara Abreu2, Dmitry Akhmetzyanov3

  • 1Institute for Biophysical Chemistry & Centre for Biomolecular Magnetic Resonance , Goethe-University Frankfurt , 60438 Frankfurt , Germany.

Journal of the American Chemical Society
|October 6, 2018
PubMed
概括

该ABC转运器MsbA在Q循环和His开关附近的额外部位结合核酸,这对其合的ATPase和逆基酶活动至关重要. 这一发现阐明了ABC蛋白中核酸结合的结构机制.

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科学领域:

  • 生物化学
  • 结构生物学
  • 膜蛋白质

背景情况:

  • 酸结合盒 (ABC) 载体 MsbA 作为一种酸驱动的脂质-A 转基因.
  • MsbA属于ABC蛋白超级家族,利用核酸结合域 (NBD) 进行ATP水解.
  • 最近MsbA表现出双重的催化作用,同时进行ATP水解和逆基酶 (rAK) 类反应.

研究的目的:

  • 研究 MsbA 中核酸结合的结构基础.
  • 阐明合ATPase-rAK活动的机制.
  • 描述 MsbA 催化循环中的核酸相互作用.

主要方法:

  • 固态NMR (传统的和DNP增强的)
  • 脉冲电子磁共振 (EPR) 光谱
  • 分子动力学 (MD) 模拟

主要成果:

  • 确定了一个额外的核酸结合点在Q循环和他的开关.
  • 证明该位点不会干扰基本的金属离子协调 (使用Mn2+作为Mg2+的替代物).
  • MD模拟证实了实验结果,详细说明了核酸的位置,方向和结合方式.

结论:

  • 新发现的核酸结合部位是MsbA合的ATPase-rAK机制的组成部分.
  • 对 MsbA 核酸结合的结构洞察力提升了对 ABC 输送器功能的理解.
  • 本研究提供了MsbA催化中的核和金属离子相互作用的详细机制.