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相关概念视频

Nucleic Acid Structure01:25

Nucleic Acid Structure

6.2K
The pentose sugar in DNA is deoxyribose, while in RNA the pentose sugar is ribose. The difference between the sugars is the presence of the hydroxyl group on the ribose's second carbon and a hydrogen on the deoxyribose's second carbon. The phosphate residue attaches to the hydroxyl group of the 5′ carbon of one sugar and the hydroxyl group of the 3′ carbon of the sugar of the next nucleotide, which forms  a 5′ to 3′ phosphodiester linkage.
DNA Structure
DNA...
6.2K
Protein Folding01:25

Protein Folding

8.1K
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
8.1K
Ribosomal RNA Synthesis02:53

Ribosomal RNA Synthesis

13.2K
Ribosome synthesis is a highly complex and coordinated process involving more than 200 assembly factors. The synthesis and processing of ribosomal components occurs not only in the nucleolus but also in the nucleoplasm and the cytoplasm of eukaryotic cells.
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
13.2K
Types of RNA01:20

Types of RNA

5.9K
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in regulating gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA Performs Diverse...
5.9K
Leaky Scanning02:28

Leaky Scanning

5.2K
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R...
5.2K
Protein Folding Quality Check in the RER01:29

Protein Folding Quality Check in the RER

3.7K
ER is the primary site for the maturation and folding of soluble and transmembrane secretory proteins. The calnexin cycle is a specific chaperone system that folds and assesses the confirmation of N-glycosylated proteins before they can exit the ER lumen. The primary players of this quality check pipeline are the lectins, ER-resident chaperones, and a glucosyl transferase enzyme. In case the calnexin system in the lumen fails to salvage a misfolded protein, it is transported to the cytoplasm...
3.7K

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相关实验视频

Updated: Jul 20, 2025

Practical Aspects of Sample Preparation and Setup of 1H R1ρ Relaxation Dispersion Experiments of RNA
08:17

Practical Aspects of Sample Preparation and Setup of 1H R1ρ Relaxation Dispersion Experiments of RNA

Published on: July 9, 2021

4.7K

当地RNA折叠经过了修订.

Maria Waldl1, Thomas Spicher1, Ronny Lorenz1

  • 1Institute for Theoretical Chemistry, University of Vienna, Währingerstraße 17, 1090 Wien, Austria.

Journal of bioinformatics and computational biology
|July 31, 2023
PubMed
概括
此摘要是机器生成的。

这项研究通过改进局部折叠算法来增强RNA二次结构预测. 维也纳RNA包中的新方法为大型RNA分子提供了更准确的分析.

关键词:
在RNA折叠过程中.地方结构 地方结构.分区的功能是分区功能.

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RNA Secondary Structure Prediction Using High-throughput SHAPE
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RNA Secondary Structure Prediction Using High-throughput SHAPE

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Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation
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Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation

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相关实验视频

Last Updated: Jul 20, 2025

Practical Aspects of Sample Preparation and Setup of 1H R1ρ Relaxation Dispersion Experiments of RNA
08:17

Practical Aspects of Sample Preparation and Setup of 1H R1ρ Relaxation Dispersion Experiments of RNA

Published on: July 9, 2021

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RNA Secondary Structure Prediction Using High-throughput SHAPE
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RNA Secondary Structure Prediction Using High-throughput SHAPE

Published on: May 31, 2013

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Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation
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Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation

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科学领域:

  • 计算生物学 计算生物学
  • 生物信息学是一种生物信息学.
  • 分子生物学分子生物学

背景情况:

  • 大型转录中的功能性RNA元素通常是局部的.
  • 局部折叠是全球RNA结构预测的实际近似.
  • 通过序列窗口平均预测可以提高准确性,但需要高效的计算.

研究的目的:

  • 为了将局部RNA折叠问题概括和正式化.
  • 引入有效的方法,以获得局部RNA结构的正确博尔兹曼样本.
  • 通过改善本地折叠能力来增强维也纳RNA包.

主要方法:

  • 开发了局部RNA折叠的简洁数学形式化.
  • 在McCaskill的算法中实现了局部随机回溯.
  • 在ViennaRNA包中引入了用于局部折叠分析的新功能.

主要成果:

  • 证明正确的博尔茨曼样本可以通过局部随机逆行追踪得到.
  • 表明局部折叠复制不会产生正确的博尔兹曼样本.
  • 能够计算最大预期准确度结构和相互信息措施.

结论:

  • 一般化的局部折叠方法为RNA结构预测提供了更准确的方法.
  • 增强的维也纳RNA包功能改善了局部RNA结构的分析.
  • 新的应用允许更好地量化RNA折叠中的序列位置灵敏度.