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相关概念视频

Bacterial RNA Polymerase00:43

Bacterial RNA Polymerase

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Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
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Bacterial Transcription01:53

Bacterial Transcription

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RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
28.2K
RNA Editing02:23

RNA Editing

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RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
9.0K
Ribozymes02:47

Ribozymes

12.3K
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can...
12.3K
Eukaryotic RNA Polymerases00:58

Eukaryotic RNA Polymerases

24.2K
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
24.2K
Transfer RNA Synthesis02:36

Transfer RNA Synthesis

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One of the unique features of tRNA is the presence of modified bases. In some tRNAs, modified bases account for nearly 20% of the total bases in the molecule. Altogether, these unusual bases protect the tRNA from enzymatic degradation by RNases.
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
11.9K

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相关实验视频

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Chemical Triphosphorylation of Oligonucleotides
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Chemical Triphosphorylation of Oligonucleotides

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催化RNA的RNA催化演化催化RNA的演化.

Nikolaos Papastavrou1, David P Horning1, Gerald F Joyce1

  • 1The Salk Institute, La Jolla, CA 92037.

Proceedings of the National Academy of Sciences of the United States of America
|March 4, 2024
PubMed
概括

高保真性RNA聚合酶 ribozymes通过准确复制功能性RNA来实现达尔文进化. 在早期生命系统和实验室进化实验中,提高真实性对于保持遗传信息至关重要.

科学领域:

  • 生命的起源研究 生命的起源研究
  • 分子进化分子进化
  • 生物化学 生物化学

背景情况:

  • 定向进化已经产生了能够进行RNA复制的RNA聚合酶 рибо酶.
  • 之前的 ribozyme 版本缺乏足够的忠实性,无法持续传播信息.
  • 头核酶是研究基于RNA的进化模型系统.

研究的目的:

  • 评估RNA聚合酶忠实性对RNA达尔文进化的影响.
  • 通过高保真复制来研究头核糖酶的进化.
  • 了解复制忠实性在维护遗传信息中的作用.

主要方法:

  • 针对RNA聚合酶 рибо酶的定向进化,以提高保真度.
  • 使用低保真性和高保真性聚合酶的并行进化实验.
  • 深度测序以跟踪序列变化和在进化时间内的适应性.
  • 选择RNA分裂活动来推动进化.

主要成果:

  • 高保真聚合酶成功复制了头 ribozymes,导致具有增加适应性的进化变体.
  • 低保真度复制导致了头功能的丧失和序列分歧.
  • 进化的头变种表现出更好的可复制性,平衡了催化活性略有下降.
关键词:
的RNA聚合酶.复制RNA复制RNA的复制指导进化是指导进化的.里博酶里博酶是什么意思

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Generation of RNA/DNA Hybrids in Genomic DNA by Transformation using RNA-containing Oligonucleotides

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Generation of RNA/DNA Hybrids in Genomic DNA by Transformation using RNA-containing Oligonucleotides
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  • 深度测序揭示了与增加的健身相关的序列的渐进分歧.
  • 结论:

    • 在达尔文系统中,高复制效率对于维持和演变功能性RNA至关重要.
    • 在实验室中,实现高保真度是重建基于RNA的生命的关键瓶.
    • 这项工作为早期基于RNA的生命的潜在进化途径提供了洞察力.