多酶类纳米酶的数据驱动进化设计
Yujie Jiang1, Zibei Chen1, Ning Sui1
1College of Materials Science and Engineering, Qingdao University of Science and Technology, 53 Zhengzhou Road, Qingdao 266042, Shandong, China.
Journal of the American Chemical Society
|March 6, 2024
概括
研究人员为多酶类纳米酶开发了一种类似遗传的进化设计. 这种方法使用纳米酶数据库和先进的计算方法来创建具有可预测性能的高度活跃的纳米酶.
科学领域:
- 材料科学
- 纳米技术
- 生物化学
背景情况:
- 多酶类纳米酶具有协同效应和级联反应,但由于复杂的活性相互作用,很难精确调节.
- 现有的纳米酶在不同的条件下表现出不同的性能,阻碍了针对特定应用的定向设计.
研究的目的:
- 为合理设计多酶类纳米酶制定理论指导的策略.
- 克服调节和预测多酶类纳米酶的联合活动的挑战.
主要方法:
- 从4159个出版物中编制了一个全面的纳米酶数据库,包括材料特性和反应条件.
- 使用聚类相关系数来确定多酶类纳米酶的关键组成因素.
- 采用量子力学/分子力学和机器学习来分析反应途径和优化纳米酶设计.
主要成果:
- 成功开发了一种类似于基因的纳米酶进化设计策略.
- 使用开发的方法创建了一个新型,高度活跃的多酶类纳米酶CuMnCo7O12.
- 展示了构建先进的多酶类纳米酶的可行协议和理论基础.
结论:
- 基因类进化设计策略为制造精确调节和高度活跃的多酶类纳米酶提供了强大的工具.
- 这种方法通过模仿材料设计的生物进化来加速纳米酶的发展.
- 这项研究为设计具有定制酶性质的功能纳米材料的未来进步奠定了基础.
相关概念视频
Catalytically Perfect Enzymes
4.0K
The theory of catalytically perfect enzymes was first proposed by W.J. Albery and J. R. Knowles in 1976. These enzymes catalyze biochemical reactions at high-speed. Their catalytic efficiency values range from 108-109 M-1s-1. These enzymes are also called 'diffusion-controlled' as the only rate-limiting step in the catalysis is that of the substrate diffusion into the active site. Examples include triose phosphate isomerase, fumarase, and superoxide dismutase.
Most enzymes...
Most enzymes...
4.0K
Introduction to Enzymes
17.7K
The use of enzymes by humans dates to 7000 BCE. Humans first used enzymes to ferment sugars and produce alcohol without knowing that this was an enzyme-catalyzed reaction. Wilhelm Kuhne coined the term 'enzyme' in 1877 from the Greek words ‘en’ meaning ‘in’ or ‘within’ and ‘zyme’ meaning ‘yeast.’
Most enzymes are proteins that speed up biochemical reactions without being consumed. Enzymes contain one or more active sites that...
Most enzymes are proteins that speed up biochemical reactions without being consumed. Enzymes contain one or more active sites that...
17.7K
Enzymes
81.5K
Inside living organisms, enzymes act as catalysts for many biochemical reactions involved in cellular metabolism. The role of enzymes is to reduce the activation energies of biochemical reactions by forming complexes with its substrates. The lowering of activation energies favor an increase in the rates of biochemical reactions.
Enzyme deficiencies can often translate into life-threatening diseases. For example, a genetic abnormality resulting in the deficiency of the enzyme G6PD...
Enzyme deficiencies can often translate into life-threatening diseases. For example, a genetic abnormality resulting in the deficiency of the enzyme G6PD...
81.5K
Introduction to Mechanisms of Enzyme Catalysis
8.1K
For many years, scientists thought that enzyme-substrate binding took place in a simple "lock-and-key" fashion. This model stated that the enzyme and substrate fit together perfectly in one instantaneous step. However, current research supports a more refined view scientists call induced fit. The induced-fit model expands upon the lock-and-key model by describing a more dynamic interaction between enzyme and substrate. As the enzyme and substrate come together, their interaction causes...
8.1K
Ribozymes
12.3K
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can...
Ribozymes can...
12.3K


