Jove
Visualize
联系我们
JoVE
x logofacebook logolinkedin logoyoutube logo
关于 JoVE
概览领导团队博客JoVE 帮助中心
作者
出版流程编辑委员会范围与政策同行评审常见问题投稿
图书馆员
用户评价订阅访问资源图书馆顾问委员会常见问题
研究
JoVE JournalMethods CollectionsJoVE Encyclopedia of Experiments存档
教育
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab Manual教师资源中心教师网站
使用条款与条件
隐私政策
政策

相关概念视频

Assembly of Cytoskeletal Filaments01:18

Assembly of Cytoskeletal Filaments

19.4K
Cytoskeletal filaments are polymeric forms of smaller protein subunits. However, individual cytoskeletal filaments may easily disassemble or associate with other similar filaments to form rigid structures. Microfilaments, made of actin monomers, rely on actin-binding proteins to form bundles and create networks of individual actin filaments. Microtubules rely on microtubule-associated proteins (MAPs) to form sturdy cylindrical structures. However, the proteins involved in forming complex...
19.4K
Protein Complex Assembly02:41

Protein Complex Assembly

10.6K
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types.  Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
10.6K
Protein Organization01:24

Protein Organization

6.4K
Proteins are polymers of amino acid residues. They are versatile and responsible for different cellular functions, including DNA replication, molecular transport, catalysis, and structural support. Proteins have a hierarchical structure comprising at least three levels of organization: primary, secondary, and tertiary structure. Some large proteins have a quaternary structure where individual protein subunits are linked together.
The primary structure of a protein is its amino acid sequence....
6.4K
Protein-protein Interfaces02:04

Protein-protein Interfaces

12.5K
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
12.5K
Protein Networks02:26

Protein Networks

3.9K
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
3.9K
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

2.5K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.5K

您也可能阅读

相关文章

通过共同作者、期刊和引用图与本文相关的文章。

排序
Same author

Progress in structure prediction and design of adaptive immune receptors.

Current opinion in structural biology·2026
Same author

Molecular mechanisms of the MLL4 complex in H3K4 methylation and p53-dependent transcription activation.

Molecular cell·2026
Same author

CliPepPI: Scalable prediction of domain-peptide specificity using contrastive learning.

bioRxiv : the preprint server for biology·2026
Same author

CSN5i-3 is an orthosteric molecular glue inhibitor of COP9 signalosome.

Nature·2026
Same author

Orthosteric Molecular Glue Inhibits COP9 Signalosome with Substrate-Dependent Potency.

bioRxiv : the preprint server for biology·2025
Same author

Calibrated Variant Effect Prediction at the Residue Level Using Conditional Score Distributions.

bioRxiv : the preprint server for biology·2025

相关实验视频

Updated: Jun 25, 2025

Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry
05:58

Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry

Published on: July 17, 2019

11.0K

综合建模与深度学习相遇:最近在建模蛋白质组合方面的进展.

Ben Shor1, Dina Schneidman-Duhovny2

  • 1The Rachel and Selim Benin School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel. Electronic address: https://twitter.com/ben_shor.

Current opinion in structural biology
|May 25, 2024
PubMed
概括

深度学习推进了结构生物学,使蛋白质结构和相互作用预测成为可能. 新的整合方法模拟了大型宏分子组件,解决了固体测量和异质性的挑战.

更多相关视频

Analyzing Protein Architectures and Protein-Ligand Complexes by Integrative Structural Mass Spectrometry
07:33

Analyzing Protein Architectures and Protein-Ligand Complexes by Integrative Structural Mass Spectrometry

Published on: October 15, 2018

14.3K
Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues
07:08

Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues

Published on: July 14, 2015

7.3K

相关实验视频

Last Updated: Jun 25, 2025

Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry
05:58

Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry

Published on: July 17, 2019

11.0K
Analyzing Protein Architectures and Protein-Ligand Complexes by Integrative Structural Mass Spectrometry
07:33

Analyzing Protein Architectures and Protein-Ligand Complexes by Integrative Structural Mass Spectrometry

Published on: October 15, 2018

14.3K
Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues
07:08

Optimization of Synthetic Proteins: Identification of Interpositional Dependencies Indicating Structurally and/or Functionally Linked Residues

Published on: July 14, 2015

7.3K

科学领域:

  • 结构生物学 结构生物学
  • 计算生物学 计算生物学
  • 生物物理学的生物物理.

背景情况:

  • 深度学习已经彻底改变了蛋白质结构预测,扩展到蛋白质-蛋白质相互作用.
  • 预测大型宏分子组合的结构仍然是一个挑战,需要专门的计算方法.

研究的目的:

  • 描述最近在建模宏分子组件方面的进展.
  • 突出应用在预测蛋白质-蛋白质相互作用和相关复合物的应用.
  • 讨论模拟复杂固体测量和异质性的挑战.

主要方法:

  • 综合建模方法. 综合建模方法.
  • 层次模型策略. 层次模型策略.
  • 蛋白相互作用网络的分析.

主要成果:

  • 展示模拟大型宏分子组件的先进技术.
  • 突出成功的应用在预测蛋白质-蛋白质相互作用.
  • 在预测复杂的石化测量和异质性方面,确定关键挑战.

结论:

  • 综合性和层次方法代表了对宏分子组件建模的最先进方法.
  • 需要进一步的研究,以克服预测复杂的固体测量和异质性的挑战,以获得准确的生物学见解.