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相关概念视频

Thermodynamic Potentials01:26

Thermodynamic Potentials

788
Thermodynamic potentials are state functions that are extremely useful in analyzing a thermodynamic system. They have dimensions of energy. The four important thermodynamic potentials are internal energy, enthalpy, Helmholtz free energy, and Gibbs free energy. These thermodynamic potentials can be expressed using two of the following variables: pressure, volume, temperature, and entropy. These two variables are expressed as the rate of change of the thermodynamic potential with respect to other...
788
Maxwell's Thermodynamic Relations01:23

Maxwell's Thermodynamic Relations

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Maxwell's thermodynamic relations are very useful in solving problems in thermodynamics. Each of Maxwell's relations relates a partial differential between quantities that can be hard to measure experimentally to a partial differential between quantities that can be easily measured. These relations are a set of equations derivable from the symmetry of the second derivatives and the thermodynamic potentials.
All thermodynamic potentials are exact differentials. Therefore, their second-order...
2.6K
Path Between Thermodynamics States01:21

Path Between Thermodynamics States

3.1K
Consider the two thermodynamic processes involving an ideal gas that are represented by paths AC and ABC in Figure 1:
3.1K
First Law Of Thermodynamics: Problem-Solving01:21

First Law Of Thermodynamics: Problem-Solving

2.6K
The first law of thermodynamics states that the change in internal energy of the system is equal to the net heat transfer into the system minus the net work done by the system. This equation is a generalized form of energy conservation and can be applied to any thermodynamic process.
The following strategies can be used to solve any problem involving the first law of thermodynamics.
2.6K
Isothermal Processes01:21

Isothermal Processes

3.6K
A thermodynamic process that occurs at constant temperature is called an isothermal process. Heat slowly flows into the system or out of the system to maintain thermal equilibrium. Processes involving phase changes like water evaporation into steam or freezing water into ice at a constant temperature are examples of Isothermal Processes.
An ideal gas can also undergo isothermal expansion or compression.
For example, consider 1 mole of an ideal gas inside an isolated cylinder at initial volume V...
3.6K
Calculating Standard Free Energy Changes02:49

Calculating Standard Free Energy Changes

20.9K
The free energy change for a reaction that occurs under the standard conditions of 1 bar pressure and at 298 K is called the standard free energy change. Since free energy is a state function, its value depends only on the conditions of the initial and final states of the system. A convenient and common approach to the calculation of free energy changes for physical and chemical reactions is by use of widely available compilations of standard state thermodynamic data. One method involves the...
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Measuring Biomolecular DSC Profiles with Thermolabile Ligands to Rapidly Characterize Folding and Binding Interactions
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TPPU_DSF:使用DSF数据计算热力学参数的Web应用程序.

Pau Martin-Malpartida1, Carles Torner1, Aurora Martinez2

  • 1Institute for Research in Biomedicine, The Barcelona Institute of Science and Technology (BIST), Baldiri Reixac, 10, Barcelona 08028, Spain.

Journal of molecular biology
|September 5, 2024
PubMed
概括

TPPU_DSF是一个免费的网络应用程序,可以自动分析差分扫描度计 (DSF) 数据. 它计算了蛋白质展开的热力学参数,改善了查中的命中检测,并降低了测试成本.

关键词:
差分扫描光测量 差分扫描光测量 差分扫描光测量高通量复合选 复合选 复合选击中选择,击中率.热转移测试试验 热转移测试热力学参数的热力学参数

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科学领域:

  • 生物化学 生化学
  • 结构生物学 结构生物学
  • 生物物理学的生物物理.

背景情况:

  • 差分扫描度法 (DSF) 被广泛用于研究蛋白质的热稳定性.
  • 对DSF数据的分析通常依赖于化温度 (Tm) 的变化,这可能不足以进行击中检测.
  • 计算热力学参数可以更全面地了解蛋白质稳定性和连接体相互作用.

研究的目的:

  • 为了介绍TPPU_DSF,一个新的,免费的,开源的Web应用程序.
  • 为了自动化分析从DSF实验中获得的蛋白质展开数据.
  • 为了从DSF数据中计算热力学参数.

主要方法:

  • 开发一个Web应用程序,TPPU_DSF.
  • 实现DSF实验的自动化数据处理.
  • 计算热力学参数,包括吉布斯自由能量展开 (ΔGu°) 的变化.

主要成果:

  • TPPU_DSF成功打开,转换,适合,并从标准DSF数据计算热力学参数.
  • 该应用程序自动化了分析过程,节省了时间和资源.
  • 与单独的Tm相比,热力学参数在化合物选中提供了一种更强大的命中识别方法.

结论:

  • TPPU_DSF通过提供自动化热力学分析来提高DSF的实用性.
  • 该软件提高了在查活动中识别蛋白质结合物的准确性和效率.
  • 通过结合热力学见解,TPPU_DSF有助于优化蛋白质结构和缓冲条件.