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相关概念视频

Mutations01:35

Mutations

34.1K
Mutations are changes in the sequence of DNA. These changes can occur spontaneously or they can be induced by exposure to environmental factors. Mutations can be characterized in a number of different ways: whether and how they alter the amino acid sequence of the protein, whether they occur over a small or large area of DNA, and whether they occur in somatic cells or germline cells.
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
34.1K
Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

14.1K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
14.1K
Mismatch Repair01:36

Mismatch Repair

39.9K
Overview
39.9K
DNA as a Genetic Template02:05

DNA as a Genetic Template

21.7K
Two structural features of the DNA molecule provide a basis for the mechanisms of heredity: the four nucleotide bases and its double-stranded nature. The Watson-Crick model of double-helical DNA structure, proposed in 1952, drew heavily upon the X-ray crystallography work of researchers Rosalind Franklin and Maurice Wilkins. Watson, Crick, and Wilkins jointly received the Nobel Prize in Physiology or Medicine for their work in 1962. Franklin was, controversially, excluded from the prize for...
21.7K
Multi-species Conserved Sequences02:51

Multi-species Conserved Sequences

3.9K
Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale  studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
3.9K
Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

11.1K
In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
11.1K

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相关实验视频

Updated: Jun 7, 2025

Following the Dynamics of Structural Variants in Experimentally Evolved Populations
04:52

Following the Dynamics of Structural Variants in Experimentally Evolved Populations

Published on: February 3, 2023

919

超级突变3:在定义的核酸环境中识别特定的突变模式,允许多状态字符.

Zena Lapp1, Hyejin Yoon1, Brian Foley1

  • 1Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM 87545, USA.

bioRxiv : the preprint server for biology
|November 18, 2024
PubMed
概括

更新后的Hypermut软件识别了具有APOBEC3诱导突变的病毒序列. 该工具通过排除非代表性的超变异序列和处理复杂对齐来改进序列分析.

科学领域:

  • 病毒学 病毒学
  • 生物信息学是一种生物信息学.
  • 基因组学就是基因组学.

背景情况:

  • 在病毒序列中,APOBEC3F和APOBEC3G酶诱导G到A的高突变.
  • 过度突变的序列可能会扭曲病毒进化研究和下游分析.
  • 之前的Hypermut版本缺乏对多状态字符和空白的支持.

研究的目的:

  • 介绍一个增强的,用户友好的Hypermut工具,用于检测病毒超变异.
  • 包含处理多状态字符和序列对齐间隙的功能.
  • 为了促进超突变检测在序列分析管道中无集成.

主要方法:

  • 开发新版本的Hypermut软件的开发.
  • 实现一个用户友好的Web和命令行界面.
  • 包括算法来处理多状态字符和序列数据中的空白.

主要成果:

  • 更新的Hypermut工具有效地检测到超突变事件,包括G到A突变.
  • 该软件现在可以容纳多状态字符和空白,提高其适用性.
  • 该工具可以直接集成到现有的序列分析工作流程中.

更多相关视频

A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe
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A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe

Published on: March 7, 2019

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Identifying Mutations by High Resolution Melting in a TILLING Population of Rice
06:10

Identifying Mutations by High Resolution Melting in a TILLING Population of Rice

Published on: September 2, 2019

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相关实验视频

Last Updated: Jun 7, 2025

Following the Dynamics of Structural Variants in Experimentally Evolved Populations
04:52

Following the Dynamics of Structural Variants in Experimentally Evolved Populations

Published on: February 3, 2023

919
A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe
07:55

A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe

Published on: March 7, 2019

8.0K
Identifying Mutations by High Resolution Melting in a TILLING Population of Rice
06:10

Identifying Mutations by High Resolution Melting in a TILLING Population of Rice

Published on: September 2, 2019

7.3K

结论:

  • 增强的Hypermut工具为识别超突变病毒序列提供了更高的准确性和多功能性.
  • 这一进步有助于在病毒进化和序列分析中获得更具代表性的结果.
  • 该工具支持指定任何突变模式和背景,超出G到A事件.