贸易池:在分子性质预测中量化原子归属值的新型可解释框架
Bingwei Ni1,2, Wanxiang Shen3, Zhuyifan Ye1
1Faculty of Applied Sciences, Macao Polytechnic University, Macao 999078, China.
Journal of chemical information and modeling
|January 6, 2026
概括
我们开发了一个新的图形神经网络 (GNN) 解释性框架,提高了原子归因准确性,以更快地发现药物. 这增强了人工智能驱动的化学太空探索,并补充了专家知识.
科学领域:
- 计算化学和化学信息学.
- 药物发现中的人工智能.
- 可解释性AI (XAI) 用于分子建模.
背景情况:
- 图形神经网络 (GNN) 在复合性质预测方面表现出色,特别是在有限的数据下.
- 目前的GNN可解释性方法在精确的原子归属方面扎,阻碍了化合物优化.
- 越来越多的人工智能产生的化学空间需要高效和可靠的XAI方法.
研究的目的:
- 提出一种新的两阶段框架,用于在GNN中计算原子归属值.
- 为了提高GNN可解释性用于复合性质预测的准确性和可靠性.
- 通过提供对 GNN 预测更深入的见解来加速药物开发过程.
主要方法:
- 一个两阶段的框架,涉及通过结构性聚合的模式培训.
- 使用子结构映射计算原子归属值.
- 对GNN的任务特定原子归属值的量化.
主要成果:
- 在芳香度/LogP/TPSA数据集上的GCN的原子归属精度提高了30%/20%/15%.
- 证明了高的皮尔森相关系数 (0.93/0.63/0.88),显著优于现有方法 (0-0.3).
- 该框架显示了模拟参数变化和结构变化的稳定性.
结论:
- 拟议的可解释框架显著提高了GNN原子归因的准确性.
- 这一进步有助于在药物发现中更有效,更可靠地优化化合物.
- 该方法为加速人工智能驱动的化学和药理学研究提供了有价值的工具.
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