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P1 or P1;? Or something else?
1The Beckman Institute, California Institute of Technology, Pasadena, CA 91125, USA. rem@xray.caltech.edu
Acta Crystallographica. Section B, Structural Science
|August 6, 2000
Summary
Many crystal structures in the Cambridge Structural Database were mislabeled with space group P1 instead of P{\bar 1}. This error, often a simple omission, affects 279 entries and may require coordinate revision for accurate structural analysis.
Area of Science:
- Crystallography
- Materials Science
- Chemical Physics
Background:
- The Cambridge Structural Database (CSD) is a key resource for crystal structure data.
- Accurate space group assignment is crucial for correct structural interpretation.
- Previous database releases have contained errors in crystallographic data.
Purpose of the Study:
- To identify and quantify errors in space group assignments within the Cambridge Structural Database.
- To investigate the nature and origin of these space group designation errors.
- To assess the impact of these errors on structural analysis and interpretation.
Main Methods:
- Analysis of unit-cell dimensions and atom coordinates for entries in the CSD (October 1998 release).
- Comparison of reported space group P1 assignments with crystallographic symmetry requirements.
- Evaluation of structural reliability and intermolecular distances based on corrected space group assignments.
Main Results:
- 279 out of nearly 1300 entries assigned to space group P1 were found to have incorrect designations.
- 157 entries with Z > 1 likely resulted from a misprint of the overline in P{\bar 1}.
- 123 entries required revision due to more fundamental errors in space group assignment.
- Chiral molecules in P1 (Z=2) sometimes exhibit pseudocenters of inversion, complicating distinction from P{\bar 1}.
Conclusions:
- A significant number of crystal structures in the CSD were mislabeled, impacting data reliability.
- Distinguishing between P1 and P{\bar 1} can be challenging for structures with deviations from centrosymmetry below ~0.1 Å.
- Revisiting and correcting space group assignments is essential for accurate crystallographic studies.