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Isolation and Chemical Characterization of Lipid A from Gram-negative Bacteria
Published on: September 16, 2013
Lipid A modifications in polymyxin-resistant Salmonella typhimurium: PMRA-dependent 4-amino-4-deoxy-L-arabinose, and
1Department of Biochemistry and the Duke NMR Spectroscopy Center, Duke University Medical Center, Durham, North Carolina 27710, USA.
Abstract:
Lipid A of Salmonella typhimurium can be resolved into multiple molecular species. Many of these substances are more polar than the predominant hexa-acylated lipid A 1,4'-bisphosphate of Escherichia coli K-12. By using new isolation methods, we have purified six lipid A subtypes (St1 to St6) from wild type S. typhimurium. We demonstrate that these lipid A variants are covalently modified with one or two 4-amino-4-deoxy-l-arabinose (l-Ara4N) moieties. Each lipid A species with a defined set of polar modifications can be further derivatized with a palmitoyl moiety and/or a 2-hydroxymyristoyl residue in place of the secondary myristoyl chain at position 3'. The unexpected finding that St5 and St6 contain two l-Ara4N residues accounts for the anomalous structures of lipid A precursors seen in S. typhimurium mutants defective in 3-deoxy-d-manno-octulosonic acid biosynthesis in which only the 1-phosphate group is modified with the l-Ara4N moiety (Strain, S. M., Armitage, I. M., Anderson, L., Takayama, K., Quershi, N., and Raetz, C. R. H. (1985) J. Biol. Chem. 260, 16089-16098). Phosphoethanolamine (pEtN)-modified lipid A species are much less abundant than l-Ara4N containing forms in wild type S. typhimurium grown in broth but accumulate to high levels when l-Ara4N synthesis is blocked in pmrA(C)pmrE(-) and pmrA(C)pmrF(-) mutants. Purification and analysis of selected compounds demonstrate that one or two pEtN moieties may be present. Our findings show that S. typhimurium contains versatile enzymes capable of modifying both the 1- and 4'-phosphates of lipid A with l-Ara4N and/or pEtN groups. PmrA null mutants of S. typhimurium produce lipid A species without any pEtN or l-Ara4N substituents. However, PmrA is not needed for the incorporation of 2-hydroxymyristate or palmitate.
Insights
Salmonella typhimurium lipid A exhibits diverse molecular species, including novel modifications with 4-amino-4-deoxy-l-arabinose (l-Ara4N) and phosphoethanolamine (pEtN). These findings reveal versatile enzymatic pathways for lipid A modification in S. typhimurium.
Area of Science:
- Microbiology
- Biochemistry
- Lipidomics
Background:
- Lipid A is a crucial component of the outer membrane in Gram-negative bacteria like Salmonella typhimurium.
- The structural diversity of Lipid A influences bacterial properties and interactions with host immune systems.
Purpose of the Study:
- To elucidate the molecular species and modifications of Lipid A in wild-type and mutant Salmonella typhimurium.
- To identify the enzymes and pathways responsible for Lipid A derivatization.
Main Methods:
- Isolation and purification of six distinct Lipid A subtypes from S. typhimurium.
- Structural analysis using advanced biochemical and mass spectrometry techniques.
- Comparative analysis of Lipid A from wild-type and mutant strains with blocked biosynthesis pathways.
Main Results:
- Identified six Lipid A subtypes in S. typhimurium, many more polar than E. coli K-12 Lipid A.
- Demonstrated covalent modification with one or two 4-amino-4-deoxy-l-arabinose (l-Ara4N) moieties.
- Showcased versatile enzymatic modification of Lipid A phosphates with l-Ara4N and/or phosphoethanolamine (pEtN).
Conclusions:
- S. typhimurium possesses versatile enzymes capable of modifying both the 1- and 4'-phosphates of Lipid A.
- The PmrA protein is essential for phosphoethanolamine (pEtN) and l-Ara4N modification but not for fatty acid acylation.
- Lipid A structural diversity in S. typhimurium is greater than previously understood, impacting precursor structures.
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