Analysis of symbolic sequences using the Jensen-Shannon divergence

Ivo Grosse1, Pedro Bernaola-Galván, Pedro Carpena

  • 1Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

Related Concept Videos

Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
Sequence Networks of Rotating Machines01:24

Sequence Networks of Rotating Machines

A Y-connected synchronous generator, grounded through a neutral impedance, is designed to produce balanced internal phase voltages with only positive-sequence components. The generator's sequence networks include a source voltage that is exclusively in the positive-sequence network. The sequence components of line-to-ground voltages at the generator terminals illustrate this configuration.
Zero-sequence current induces a voltage drop across the generator's neutral impedance and other...
Per-Unit Sequence Models01:26

Per-Unit Sequence Models

An ideal Y-Y transformer, grounded through neutral impedances, displays per-unit sequence networks akin to those of a single-phase ideal transformer when subjected to balanced positive- or negative-sequence currents. These currents do not produce neutral currents, and their associated voltage drops.
Zero-sequence currents, which are identical in magnitude and phase, generate a neutral current, resulting in voltage drops across the neutral impedance and the low-voltage winding. If the...
Sequences01:29

Sequences

Sequences are fundamental mathematical objects consisting of ordered lists of numbers that follow a specific rule or pattern. Sequences are critical in various mathematical concepts, including calculus, series, and number theory. They can model real-world phenomena such as population growth, financial investments, and physical processes like the diminishing height of a bouncing ball.Each number in a sequence is referred to as a term. Typically, the terms are denoted as a1, a2, a3,…, where the...
Introduction to Sequences01:26

Introduction to Sequences

The ancient Greek philosopher Zeno of Elea proposed a series of paradoxes to challenge prevailing notions of motion and continuity. One such paradox imagines a man walking toward a door but only ever covering half the remaining distance with each step. This sequence of movements—first one-half, then one-quarter, then one-eighth of the total distance, and so on—forms a mathematical concept known as a geometric sequence. Each term is half of the previous one and can be written...
Convergence of Sequences01:26

Convergence of Sequences

A sequence is a function defined on the natural numbers that assigns a value to each index. It can be understood as an ordered list of terms generated one after another. In mathematical analysis, an important question is whether the terms of a sequence approach a single real number as the index becomes very large. When this happens, the sequence is said to converge, and the value approached is called the limit. From a graphical perspective, convergence means that the plotted terms approach a...