Related Experiment Video
Updated: Jul 28, 2026

11:19
Inducing a Site Specific Replication Blockage in E. coli Using a Fluorescent Repressor Operator System
Published on: August 21, 2016
Cellular localisation of the clamp protein during DNA replication
Kritaya Kongsuwan1, Brian P Dalrymple, Gene Wijffels
1CSIRO Division of Livestock Industries, 120 Meiers Road, 4068, Indooroopilly, Qld, Australia. kritaya.kongsuwan@csiro.au
FEMS Microbiology Letters
|November 19, 2002
Summary
Green fluorescent protein (GFP) fused to the beta subunit of DNA polymerase III visualized bacterial DNA replication. This fusion protein
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- Escherichia coli DNA polymerase III holoenzyme is crucial for DNA replication.
- Visualizing protein dynamics during bacterial DNA replication is essential for understanding cell division.
Purpose of the Study:
- To visualize the dynamics of the beta subunit of DNA polymerase III during DNA replication in live Escherichia coli cells.
- To investigate the spatiotemporal localization of DNA polymerase III during replication.
Main Methods:
- Gene fusion of beta subunit with green fluorescent protein (GFP).
- Expression of the GFP-beta fusion protein in Escherichia coli under lac promoter control.
- Microscopy to observe fluorescent foci in live cells.
Main Results:
- Formation of GFP-beta fluorescent foci required DNA replication.
- The number of GFP-beta foci per cell correlated with cell growth rate.
- GFP-beta foci localized near the midcell and migrated to opposite poles during replication.
Conclusions:
- The GFP-beta fusion protein serves as a reliable marker for DNA replication in Escherichia coli.
- The observed dynamics of GFP-beta foci suggest a coordinated process of DNA replication and segregation.
More Related Videos
Related Concept Videos
The DNA Replication Fork
An organism’s genome needs to be duplicated in an efficient and error-free manner for its growth and survival. The replication fork is a Y-shaped active region where two strands of DNA are separated and replicated continuously. The coupling of DNA unzipping and complementary strand synthesis is a characteristic feature of a replication fork. Organisms with small circular DNA, such as E. coli, often have a single origin of replication; therefore, they have only two replication forks, one in...
DNA Helicases
DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...
The Replisome
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
Restarting Stalled Replication Forks
DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart, a...
S-Cdk Initiates DNA Replication
The cell cycle is a series of events leading to DNA duplication followed by the division of cell content to form two daughter cells. The cell cycle progresses in four stages—the cell increases in size (gap 1 or G1-phase), duplicates its DNA (synthesis or S-phase), prepares to divide (gap 2 or G2-phase), and divides (mitosis or M-phase).
Two states at the origin of replication
In eukaryotes, the initiation of replication occurs at many sites on the chromosomes, called the origins of replication.
Two states at the origin of replication
In eukaryotes, the initiation of replication occurs at many sites on the chromosomes, called the origins of replication.
The DNA Replication Fork
An organism’s genome needs to be duplicated in an efficient and error-free manner for its growth and survival. The replication fork is a Y-shaped active region where two strands of DNA are separated and replicated continuously. The coupling of DNA unzipping and complementary strand synthesis is a characteristic feature of a replication fork. Organisms with small circular DNA, such as E. coli, often have a single origin of replication; therefore, they have only two replication forks, one in...

