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DNA demethylating agents and chromatin-remodelling drugs: which, how and why?
Ana Villar-Garea1, Manel Esteller
1Cancer Epigenetics Laboratory, Molecular Pathology Program, Spanish National Cancer Center, 28029, Madrid, Spain.
Abstract:
DNA hypermethylation at the CpG dinucleotides clustered in "islands" in the promoter regions of genes causes transcriptional repression through the remodelling of chromatin. Aberrant methylation patterns of tumor suppressor genes and their subsequent silencing constitute a common feature of many cancers. Thus, the search for drugs that interfere in methylation-mediated gene repression has become one of the major goals in the design of cancer therapies. The major actors in the mammalian methylation system are DNA-methyltransferases (DNMTs), and methyl-CpG-binding proteins (MBDs), which recognize methylated cytosine and recruit repressor complexes, including histone deacetylases (HDACs). In this context, two major groups of drugs can be distinguished. The first one is constituted by substances that inhibit the action of DNMTs, either competing with cytosine or with S-adenosylmethionine (SAM, AdoMet) or acting over the DNMTs themselves. The second group involves compounds that inhibit subunits of the repressor complexes, such as HDACs. In this manuscript we review these two different groups of drugs, discussing their properties and the side effects that have been described (that occur by interference with other metabolic pathways). We also propose the logical pharmacological extension of these findings to design more specific and effective drugs for the prevention and treatment of human cancer.
Insights
Cancer therapies are exploring drugs targeting DNA methylation. These drugs inhibit DNA-methyltransferases (DNMTs) or histone deacetylases (HDACs) to reverse gene silencing and treat cancer.
Area of Science:
- Epigenetics
- Cancer Biology
- Pharmacology
Background:
- DNA hypermethylation in gene promoter regions causes transcriptional repression and gene silencing.
- Aberrant methylation patterns are common in cancer, often silencing tumor suppressor genes.
- Targeting methylation-mediated gene repression is a key strategy in cancer therapy design.
Purpose of the Study:
- To review drugs that interfere with DNA methylation-mediated gene repression.
- To discuss the properties and side effects of these anti-cancer drugs.
- To propose strategies for designing more specific and effective cancer therapeutics.
Main Methods:
- Review of two major drug classes: DNMT inhibitors and HDAC inhibitors.
- Analysis of drug mechanisms, including competition with cytosine or SAM, and direct DNMT inhibition.
- Examination of compounds inhibiting repressor complex subunits like HDACs.
Main Results:
- Two main drug groups targeting epigenetic modifications in cancer were identified: DNMT inhibitors and HDAC inhibitors.
- DNMT inhibitors act by competing with cytosine or S-adenosylmethionine (SAM) or directly on DNMTs.
- HDAC inhibitors target repressor complexes, including histone deacetylases.
Conclusions:
- Drugs targeting DNA methylation and associated epigenetic machinery offer promising avenues for cancer treatment.
- Understanding drug properties and side effects is crucial for optimizing therapeutic strategies.
- Further research can lead to the development of more specific and effective drugs for cancer prevention and treatment.
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