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Updated: Aug 31, 2026

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
Published on: December 7, 2021
Functional nodes in dynamic neural networks for bioprocess modelling
M Fellner1, A Delgado, T Becker
1Lehrstuhl für Fluidmechanik und Prozessautomation, Technische Universität München, Aussenstelle Freising-Weihenstephan, Weihenstephaner Steig 23, 85350 Freising, Germany. markus.fellner@epost.de
Abstract:
This contribution presents a novel method for the direct integration of a-priori knowledge in a neural network and its application for the online determination of a secondary metabolite during industrial yeast fermentation. Hereby, existing system knowledge is integrated in an artificial neural network (ANN) by means of 'functional nodes'. A generalized backpropagation algorithm is presented. For illustration, a set of ordinary differential equations describing the diacetyl formation and degradation during the cultivation is incorporated in a functional node and integrated in a dynamic feedforward neural network in a hybrid manner. The results show that a hybrid modelling approach exploiting available a-priori knowledge and experimental data can considerably outperform a pure data-based modelling approach with respect to robustness, generalization and necessary amount of training data. The number of training sets were decreased by 50%, obtaining the same accuracy as in a conventional approach. All incorrect decisions, according to defined cost criteria obtained with the conventional ANN, were avoided.
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