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Methyl-CpG binding domain column chromatography as a tool for the analysis of genomic DNA methylation

Masahiko Shiraishi1, Azumi Sekiguchi, Adam J Oates

  • 1DNA Methylation and Genome Function Project, National Cancer Center Research Institute, 1-1, Tsukiji 5-chome, Chuo-ku, Tokyo 104-0045, Japan. mshirais@gan2.res.ncc.go.jp

Analytical Biochemistry
|May 12, 2004
PubMed
Abstract

No abstract available in PubMed .

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Chromatin immunoprecipitation, or ChIP, is an antibody-based technique used to identify sites on DNA that bind to transcription factors of interest or histone proteins. It also helps determine the type of histone modifications such as acetylation, phosphorylation, or methylation.
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ChIP can be divided into two types - X-ChIP and N-ChIP. X-ChIP involves in vivo cross-linking of histones and regulatory proteins to DNA, fragmenting the DNA by sonication, and isolating the protein-DNA...

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